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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:11.5 nTPM
HPA:11.5 nTPM
GTEx:9.9 nTPM
FANTOM5:17.4 Scaled Tags Per Million
Pig:18.0 nTPM
Mouse:16.2 nTPM
Allen mouse:1.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA028440
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 11.5
Sample id Sample description nTPM
Hippocampus
nTPM: 11.1
1898 Male, age 80, left hemisphere 11.6
1911 Female, age 85, right hemisphere 11.1
2529 Female, age 94, left hemisphere 11.1
2148 Female, age 91, left hemisphere 10.9
2621 Female, age 67, right hemisphere 10.9
1855 Male, age 76, left hemisphere 10.7
Dentate gyrus
nTPM: 10.6
2010 Male, age 76, both hemispheres 11.0
2528 Male, age 74, both hemispheres 11.0
2530 Female, age 94, left hemisphere 10.8
1927 Female, age 91, both hemispheres 10.4
2246 Female, age 85, both hemispheres 10.3
2531 Female, age 67, both hemispheres 10.1
Entorhinal gyrus
nTPM: 11.2
1938 Female, age 85, left hemisphere 12.9
2117 Female, age 91, right hemisphere 11.9
2686 Male, age 75, right hemisphere 11.7
1787 Male, age 76, left hemisphere 11.0
2764 Male, age 80, right hemisphere 10.4
2613 Female, age 94, left hemisphere 9.5
Hippocampus, CA1
nTPM: 10.7
2527 Male, age 74, both hemispheres 11.4
1873 Female, age 85, both hemispheres 11.0
2045 Male, age 76, both hemispheres 11.0
2082 Female, age 91, right hemisphere 10.8
2749 Male, age 80, left hemisphere 9.7
Hippocampus, CA2
nTPM: 10.8
2249 Male, age 74, both hemispheres 11.4
1940 Female, age 85, left hemisphere 11.2
2113 Female, age 91, right hemisphere 10.8
1892 Male, age 76, both hemispheres 10.7
1963 Male, age 80, left hemisphere 10.7
2437 Female, age 94, left hemisphere 10.1
Hippocampus, CA3
nTPM: 10.4
1891 Female, age 85, both hemispheres 12.4
1867 Male, age 76, both hemispheres 10.9
2436 Male, age 74, both hemispheres 10.3
2137 Male, age 80, left hemisphere 9.8
2861 Female, age 67, both hemispheres 9.7
2620 Female, age 94, left hemisphere 9.2
Parahippocampal cortex
nTPM: 11.1
1850 Male, age 80, both hemispheres 12.4
1990 Female, age 91, right hemisphere 12.0
2018 Male, age 76, both hemispheres 11.6
2692 Male, age 74, both hemispheres 11.6
1933 Female, age 85, both hemispheres 11.4
2532 Female, age 72, left hemisphere 11.1
2250 Female, age 67, right hemisphere 10.8
2693 Female, age 94, both hemispheres 10.3
2245 Female, age 91, both hemispheres 10.1
2622 Female, age 67, right hemisphere 9.6
Perirhinal gyrus
nTPM: 11.3
1841 Female, age 85, right hemisphere 12.3
2848 Male, age 76, right hemisphere 12.0
1794 Male, age 80, right hemisphere 11.3
1847 Female, age 91, left hemisphere 11.0
2521 Female, age 94, right hemisphere 9.9
Subiculum
nTPM: 11.5
2042 Male, age 76, both hemispheres 12.2
1977 Female, age 85, both hemispheres 11.9
1901 Male, age 80, both hemispheres 11.8
2438 Female, age 94, left hemisphere 11.5
2729 Female, age 91, right hemisphere 10.9
2619 Male, age 74, both hemispheres 10.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 9.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 9.9
Samples: 197

Max nTPM: 19.2
Min nTPM: 5.1
Std nTPM: 2.7
Median nTPM: 9.3
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 19.2
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 18.4
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 18.2
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 17.9
GTEX-11ZVC-0011-R1b-SM-5BC6M 50-59 years, female 16.5
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 16.0
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 16.0
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 15.9
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 15.4
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 15.3
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 15.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 17.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 17.4
FF:10153-102I9 76 years, female 21.2
FF:10169-103B7 60 years, female 13.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 18.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 18.1
Samples: 4

Max nTPM: 20.9
Min nTPM: 15.0
Sample A Female 20.9
Sample B Female 15.7
Sample C Male 20.6
Sample D Male 15.0
Entorhinal cortex
nTPM: 14.3
Samples: 4

Max nTPM: 15.6
Min nTPM: 12.9
Sample A Female 14.0
Sample B Female 14.8
Sample C Male 15.6
Sample D Male 12.9
Subiculum
nTPM: 16.4
Samples: 4

Max nTPM: 19.2
Min nTPM: 14.8
Sample A Female 19.2
Sample B Female 14.8
Sample C Male 15.2
Sample D Male 16.4
Ventral hippocampus
nTPM: 15.3
Samples: 4

Max nTPM: 18.5
Min nTPM: 13.1
Sample A Female 18.5
Sample B Female 15.4
Sample C Male 13.1
Sample D Male 14.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 16.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 14.4
Samples: 4

Max nTPM: 15.9
Min nTPM: 11.8
Sample A Male 15.5
Sample B Male 14.3
Sample C Female 15.9
Sample D Female 11.8
Hippocampal formation
nTPM: 16.2
Samples: 4

Max nTPM: 17.3
Min nTPM: 14.2
Sample A Male 17.3
Sample B Male 17.0
Sample C Female 16.3
Sample D Female 14.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.5
68633324 Antisense, RP_050125_02_F10, Mouse strain C57BL/6J (56 days, male) 1.5

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