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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Mouse brain, Intensity
Hippocampal formationi 		107.009
RNA expressioni
Consensus:143.1 nTPM
HPA:143.1 nTPM
GTEx:89.8 nTPM
FANTOM5:208.6 Scaled Tags Per Million
Pig:216.4 nTPM
Mouse:193.6 nTPM
Allen mouse:14.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA002981Antibody CAB025746
Glial cells Not detectedNot detected
Neuronal cells Not detectedNot detected





HIPPOCAMPAL FORMATION - Mouse brain profilei , antibody CAB025746
Hippocampal formation mean intensity 107.009
intensityi
FRONT BACK
Polymorph layer of the dentate gyrus 51.079
Molecular layer of the dentate gyrus 62.419
Granular dentate gyrus 60.784
CA1 - oriens layer 65.931
CA1 - pyramidal layer 56.428
CA1 - radiatum layer 72.856
CA2 - oriens layer 90.390
CA2 - pyramidal layer 65.003
CA2 - radiatum layer 84.149
CA3 - oriens layer 107.009
CA3 - pyramidal layer 63.847
CA3 - radiatum layer 99.885
Stratum lucidum 59.497
Lacunosum moleculare 53.788
Subiculum 33.700

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 143.1
Sample id Sample description nTPM
Hippocampus
nTPM: 98.9
1855 Male, age 76, left hemisphere 145.0
1898 Male, age 80, left hemisphere 120.9
2621 Female, age 67, right hemisphere 105.4
2148 Female, age 91, left hemisphere 93.5
2529 Female, age 94, left hemisphere 71.2
1911 Female, age 85, right hemisphere 57.4
Dentate gyrus
nTPM: 96.4
1927 Female, age 91, both hemispheres 116.7
2010 Male, age 76, both hemispheres 110.7
2530 Female, age 94, left hemisphere 107.6
2528 Male, age 74, both hemispheres 82.0
2531 Female, age 67, both hemispheres 81.3
2246 Female, age 85, both hemispheres 80.3
Entorhinal gyrus
nTPM: 86.1
2764 Male, age 80, right hemisphere 104.8
1787 Male, age 76, left hemisphere 90.3
2613 Female, age 94, left hemisphere 89.9
2686 Male, age 75, right hemisphere 83.2
1938 Female, age 85, left hemisphere 82.5
2117 Female, age 91, right hemisphere 66.1
Hippocampus, CA1
nTPM: 125.6
2749 Male, age 80, left hemisphere 212.2
2045 Male, age 76, both hemispheres 118.7
2082 Female, age 91, right hemisphere 109.6
1873 Female, age 85, both hemispheres 94.7
2527 Male, age 74, both hemispheres 92.8
Hippocampus, CA2
nTPM: 92.1
1892 Male, age 76, both hemispheres 110.6
1963 Male, age 80, left hemisphere 107.2
2113 Female, age 91, right hemisphere 94.3
2437 Female, age 94, left hemisphere 82.6
1940 Female, age 85, left hemisphere 81.0
2249 Male, age 74, both hemispheres 76.7
Hippocampus, CA3
nTPM: 102.0
2137 Male, age 80, left hemisphere 177.4
2861 Female, age 67, both hemispheres 114.4
2620 Female, age 94, left hemisphere 113.2
1867 Male, age 76, both hemispheres 89.0
2436 Male, age 74, both hemispheres 73.3
1891 Female, age 85, both hemispheres 45.0
Parahippocampal cortex
nTPM: 102.6
2245 Female, age 91, both hemispheres 138.1
1850 Male, age 80, both hemispheres 113.8
2693 Female, age 94, both hemispheres 110.3
2250 Female, age 67, right hemisphere 110.2
2622 Female, age 67, right hemisphere 106.8
2018 Male, age 76, both hemispheres 102.9
2532 Female, age 72, left hemisphere 101.6
1933 Female, age 85, both hemispheres 89.2
1990 Female, age 91, right hemisphere 82.5
2692 Male, age 74, both hemispheres 70.5
Perirhinal gyrus
nTPM: 143.1
2521 Female, age 94, right hemisphere 168.4
1794 Male, age 80, right hemisphere 161.5
1847 Female, age 91, left hemisphere 154.7
1841 Female, age 85, right hemisphere 118.8
2848 Male, age 76, right hemisphere 112.0
Subiculum
nTPM: 68.6
1901 Male, age 80, both hemispheres 86.0
2619 Male, age 74, both hemispheres 71.6
1977 Female, age 85, both hemispheres 68.4
2042 Male, age 76, both hemispheres 67.1
2729 Female, age 91, right hemisphere 65.9
2438 Female, age 94, left hemisphere 52.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 89.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 89.8
Samples: 197

Max nTPM: 274.1
Min nTPM: 12.0
Std nTPM: 48.3
Median nTPM: 78.6
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 274.1
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 237.5
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 216.9
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 216.7
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 203.3
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 201.6
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 201.3
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 197.4
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 191.4
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 189.4
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 177.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 208.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 208.6
FF:10169-103B7 60 years, female 266.8
FF:10153-102I9 76 years, female 150.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 216.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 126.2
Samples: 4

Max nTPM: 187.4
Min nTPM: 78.7
Sample A Female 187.4
Sample B Female 153.5
Sample C Male 78.7
Sample D Male 85.2
Entorhinal cortex
nTPM: 216.5
Samples: 4

Max nTPM: 287.1
Min nTPM: 160.4
Sample A Female 287.1
Sample B Female 160.4
Sample C Male 225.7
Sample D Male 192.6
Subiculum
nTPM: 155.0
Samples: 4

Max nTPM: 214.1
Min nTPM: 126.5
Sample A Female 214.1
Sample B Female 126.5
Sample C Male 134.5
Sample D Male 144.7
Ventral hippocampus
nTPM: 131.1
Samples: 4

Max nTPM: 170.3
Min nTPM: 86.0
Sample A Female 170.3
Sample B Female 86.0
Sample C Male 151.5
Sample D Male 116.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 193.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 193.6
Samples: 4

Max nTPM: 246.0
Min nTPM: 169.0
Sample A Male 173.7
Sample B Male 185.8
Sample C Female 169.0
Sample D Female 246.0
Hippocampal formation
nTPM: 174.2
Samples: 4

Max nTPM: 203.6
Min nTPM: 152.9
Sample A Male 159.5
Sample B Male 180.7
Sample C Female 203.6
Sample D Female 152.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 14.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 14.7
69169911 Antisense, RP_050321_04_D11, Mouse strain C57BL/6J (56 days, male) 14.7

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