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KCNJ9
MIDBRAIN - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:49.8 nTPM
HPA:49.8 nTPM
GTEx:47.9 nTPM
FANTOM5:70.6 Scaled Tags Per Million
Pig:18.4 nTPM
Mouse:25.5 nTPM
Allen mouse:5.1 Expression energy

MIDBRAIN - HPA Brain RNA-seq
Max nTPM 49.8
Sample id Sample description nTPM
Cuneiform nucleus
nTPM: 42.8
2586 Male, age 75, left hemisphere 52.8
2019 Male, age 18, unknown 52.2
2219 Male, age 76, both hemispheres 47.2
2666 Male, age 74, left hemisphere 46.5
1827 Male, age 72, unknown 44.3
2828 Female, age 72, unknown 43.0
2411 Female, age 72, unknown 36.8
1830 Male, age 51, unknown 35.9
1870 Female, age 42, unknown 35.5
1833 Male, age 53, unknown 34.2
Dorsal raphe nucleus
nTPM: 28.9
2750 Male, age 76, both hemispheres 35.1
1828 Male, age 53, unknown 29.3
2298 Female, age 72, unknown 27.1
2016 Female, age 72, unknown 26.7
2047 Male, age 72, unknown 26.3
Inferior colliculus
nTPM: 33.8
2097 Female, age 72, unknown 37.4
1890 Male, age 53, unknown 35.9
1848 Female, age 42, unknown 31.7
2849 Male, age 72, unknown 30.4
Median raphe nucleus
nTPM: 29.9
2220 Male, age 76, midline 29.9
Pedunculopontine tegmental nucleus
nTPM: 34.0
1921 Female, age 85, both hemispheres 34.8
2334 Male, age 80, both hemispheres 33.8
2338 Male, age 61, both hemispheres 33.3
Periaquaductal grey, anterior
nTPM: 36.5
1795 Male, age 51, unknown 43.0
2502 Female, age 75, unknown 34.7
1947 Male, age 18, unknown 31.9
Periaquaductal grey, dorsal
nTPM: 30.5
1831 Male, age 72, unknown 38.3
2464 Female, age 72, unknown 31.6
1840 Male, age 53, unknown 27.0
2850 Male, age 76, both hemispheres 25.2
Periaquaductal grey, lateral
nTPM: 30.2
2053 Male, age 18, unknown 35.0
2272 Male, age 74, both hemispheres 29.3
2140 Male, age 76, both hemispheres 26.4
Pretectal area
nTPM: 49.8
1816 Male, age 51, unknown 76.1
1815 Male, age 53, unknown 71.8
2007 Male, age 72, unknown 70.4
1944 Female, age 72, unknown 67.9
1817 Female, age 42, unknown 66.2
2667 Female, age 75, unknown 36.4
2407 Male, age 75, both hemispheres 36.3
2316 Male, age 76, right hemisphere 34.0
2825 Male, age 18, unknown 31.1
2224 Female, age 72, unknown 29.0
2273 Male, age 74, both hemispheres 28.6
Red nucleus
nTPM: 46.4
2588 Male, age 74, left hemisphere 60.8
2785 Male, age 18, unknown 58.1
2725 Female, age 75, unknown 54.0
2584 Male, age 75, left hemisphere 51.4
2503 Female, age 72, unknown 50.0
2823 Male, age 76, right hemisphere 45.6
1865 Male, age 51, unknown 43.4
1904 Male, age 53, unknown 42.6
2227 Male, age 72, unknown 38.5
2769 Male, age 72, unknown 38.5
1954 Female, age 42, unknown 37.7
1821 Female, age 72, unknown 36.8
Substantia nigra
nTPM: 40.0
1889 Female, age 72, unknown 53.2
2583 Male, age 75, right hemisphere 47.4
2665 Male, age 74, both hemispheres 45.3
2590 Female, age 75, unknown 39.9
1851 Male, age 51, unknown 39.1
1916 Female, age 42, unknown 38.8
2409 Female, age 72, unknown 38.5
1941 Male, age 53, unknown 36.9
2241 Male, age 72, unknown 31.0
2699 Male, age 18, unknown 30.3
Superior colliculus
nTPM: 44.8
2087 Female, age 72, unknown 58.3
2261 Male, age 18, unknown 54.7
1796 Male, age 53, unknown 48.4
1913 Female, age 42, unknown 48.0
1995 Male, age 72, unknown 47.8
2668 Female, age 75, unknown 46.3
1895 Male, age 76, right hemisphere 38.0
2587 Male, age 74, left hemisphere 37.8
2664 Male, age 75, both hemispheres 35.6
1839 Male, age 51, unknown 32.6
Ventral tegmental area
nTPM: 35.9
2410 Female, age 72, unknown 45.0
2218 Male, age 76, both hemispheres 37.1
2223 Female, age 72, unknown 37.0
1915 Female, age 42, unknown 33.2
1942 Male, age 51, unknown 31.7
2021 Male, age 53, unknown 31.1

MIDBRAIN - GTEx RNA-seqi
Average nTPM 47.9
GTEx sample id Sample description nTPM
Brain - Substantia nigra
Average nTPM: 47.9
Samples: 139

Max nTPM: 160.2
Min nTPM: 16.3
Std nTPM: 25.2
Median nTPM: 42.2
GTEX-139TS-0011-R2b-SM-5J1MX 60-69 years, male 160.2
GTEX-1LB8K-0011-R2a-SM-EZ6MQ 50-59 years, male 151.9
GTEX-UTHO-0011-R2A-SM-3GIKC 60-69 years, male 149.2
GTEX-X4XX-0011-R2A-SM-3P623 60-69 years, male 130.9
GTEX-ZV68-0011-R2a-SM-4YCDK 50-59 years, female 121.9
GTEX-1GN1U-0011-R2a-SM-CL53A 50-59 years, female 98.0
GTEX-12WSD-0011-R2a-SM-5LZWB 60-69 years, female 93.7
GTEX-1LVA9-0011-R2a-SM-EZ6MJ 50-59 years, male 90.9
GTEX-13CF2-0011-R2a-SM-5L3DC 60-69 years, male 86.9
GTEX-1IKOH-0011-R2a-SM-CMKHO 60-69 years, female 84.3
GTEX-13NYB-0011-R2a-SM-5MR3C 40-49 years, male 81.6
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MIDBRAIN - FANTOM5 CAGEi
Max Scaled Tags Per Million 70.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Substantia nigra
Scaled Tags Per Million: 70.6
FF:10158-103A5 76 years, female 70.6

MIDBRAIN - Pig RNA-seqi
Average nTPM 18.4
Pig sample Sample description nTPM
Midbrain
nTPM: 18.3
Samples: 4

Max nTPM: 28.9
Min nTPM: 9.2
Sample A Female 19.6
Sample B Female 9.2
Sample C Male 28.9
Sample D Male 15.4
Periaqueductal gray
nTPM: 9.0
Samples: 3

Max nTPM: 9.4
Min nTPM: 8.4
Sample B Female 8.4
Sample C Male 9.4
Sample D Male 9.1
Substantia nigra
nTPM: 9.9
Samples: 4

Max nTPM: 11.9
Min nTPM: 7.8
Sample A Female 9.3
Sample B Female 7.8
Sample C Male 11.9
Sample D Male 10.6
Superior colliculi
nTPM: 18.5
Samples: 4

Max nTPM: 31.7
Min nTPM: 11.4
Sample A Female 11.4
Sample B Female 12.2
Sample C Male 31.7
Sample D Male 18.6

MIDBRAIN - Mouse RNA-seqi
Average nTPM 25.5
Mouse sample Sample description nTPM
Midbrain
nTPM: 25.5
Samples: 4

Max nTPM: 29.2
Min nTPM: 23.6
Sample A Male 23.9
Sample B Male 23.6
Sample C Female 29.2
Sample D Female 25.2

MIDBRAIN - Allen Mouse ISHi
Max Expression energy 5.1
Allen experiment id Experiment description Expression energy
Midbrain
Expression energy: 5.1
69201558 Antisense, RP_050317_03_B07, Mouse strain C57BL/6J (56 days, male) 8.4
72119580 Antisense, RP_051017_04_A03, Mouse strain C57BL/6J (56 days, male) 4.3
73512202 Antisense, RP_050713_01_E08, Mouse strain C57BL/6J (56 days, male) 2.5
70919537 Antisense, RP_050713_01_E08, Mouse strain C57BL/6J (56 days, male) 1.7

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The Human Protein Atlas

The Human Protein Atlas project is funded
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