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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:29.9 nTPM
HPA:29.9 nTPM
GTEx:23.4 nTPM
FANTOM5:59.5 Scaled Tags Per Million
Pig:36.4 nTPM
Mouse:39.5 nTPM
Allen mouse:1.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA054846Antibody CAB021982
Glial cells Not detectedNot detected
Neuronal cells MediumMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 29.9
Sample id Sample description nTPM
Hippocampus
nTPM: 29.1
1911 Female, age 85, right hemisphere 30.4
1855 Male, age 76, left hemisphere 29.6
2529 Female, age 94, left hemisphere 29.6
2621 Female, age 67, right hemisphere 29.6
1898 Male, age 80, left hemisphere 29.4
2148 Female, age 91, left hemisphere 26.1
Dentate gyrus
nTPM: 28.1
2530 Female, age 94, left hemisphere 31.5
2010 Male, age 76, both hemispheres 30.4
2528 Male, age 74, both hemispheres 28.8
2246 Female, age 85, both hemispheres 28.1
1927 Female, age 91, both hemispheres 25.4
2531 Female, age 67, both hemispheres 24.4
Entorhinal gyrus
nTPM: 27.3
2117 Female, age 91, right hemisphere 31.3
1938 Female, age 85, left hemisphere 29.0
2764 Male, age 80, right hemisphere 28.0
1787 Male, age 76, left hemisphere 27.5
2613 Female, age 94, left hemisphere 25.1
2686 Male, age 75, right hemisphere 23.2
Hippocampus, CA1
nTPM: 27.1
2527 Male, age 74, both hemispheres 28.4
2045 Male, age 76, both hemispheres 27.5
1873 Female, age 85, both hemispheres 27.4
2082 Female, age 91, right hemisphere 26.2
2749 Male, age 80, left hemisphere 26.1
Hippocampus, CA2
nTPM: 29.4
2249 Male, age 74, both hemispheres 33.0
1892 Male, age 76, both hemispheres 29.7
2437 Female, age 94, left hemisphere 29.6
1940 Female, age 85, left hemisphere 29.3
1963 Male, age 80, left hemisphere 27.8
2113 Female, age 91, right hemisphere 26.7
Hippocampus, CA3
nTPM: 27.8
2436 Male, age 74, both hemispheres 31.9
1891 Female, age 85, both hemispheres 31.5
1867 Male, age 76, both hemispheres 28.7
2620 Female, age 94, left hemisphere 26.7
2137 Male, age 80, left hemisphere 24.8
2861 Female, age 67, both hemispheres 23.4
Parahippocampal cortex
nTPM: 26.7
2532 Female, age 72, left hemisphere 27.8
1850 Male, age 80, both hemispheres 27.7
2018 Male, age 76, both hemispheres 27.7
2692 Male, age 74, both hemispheres 27.5
2250 Female, age 67, right hemisphere 27.3
1990 Female, age 91, right hemisphere 27.2
1933 Female, age 85, both hemispheres 27.0
2245 Female, age 91, both hemispheres 25.5
2693 Female, age 94, both hemispheres 25.5
2622 Female, age 67, right hemisphere 23.5
Perirhinal gyrus
nTPM: 27.0
1841 Female, age 85, right hemisphere 27.6
1794 Male, age 80, right hemisphere 27.2
1847 Female, age 91, left hemisphere 27.1
2521 Female, age 94, right hemisphere 26.6
2848 Male, age 76, right hemisphere 26.3
Subiculum
nTPM: 29.9
2438 Female, age 94, left hemisphere 33.5
2042 Male, age 76, both hemispheres 31.5
1901 Male, age 80, both hemispheres 29.9
1977 Female, age 85, both hemispheres 28.9
2619 Male, age 74, both hemispheres 28.0
2729 Female, age 91, right hemisphere 27.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 23.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 23.4
Samples: 197

Max nTPM: 41.2
Min nTPM: 12.6
Std nTPM: 5.8
Median nTPM: 22.2
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 41.2
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 40.3
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 38.9
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 38.2
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 37.2
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 36.6
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 36.4
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 36.2
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 36.0
GTEX-1E2YA-0011-R1b-SM-CJI29 50-59 years, male 35.9
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 34.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 59.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 59.5
FF:10169-103B7 60 years, female 66.9
FF:10153-102I9 76 years, female 52.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 36.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 36.4
Samples: 4

Max nTPM: 45.9
Min nTPM: 27.4
Sample A Female 45.9
Sample B Female 34.4
Sample C Male 37.9
Sample D Male 27.4
Entorhinal cortex
nTPM: 30.9
Samples: 4

Max nTPM: 38.2
Min nTPM: 25.5
Sample A Female 38.2
Sample B Female 29.7
Sample C Male 30.3
Sample D Male 25.5
Subiculum
nTPM: 32.0
Samples: 4

Max nTPM: 39.9
Min nTPM: 28.5
Sample A Female 39.9
Sample B Female 28.5
Sample C Male 30.2
Sample D Male 29.5
Ventral hippocampus
nTPM: 34.8
Samples: 4

Max nTPM: 43.3
Min nTPM: 24.6
Sample A Female 36.7
Sample B Female 24.6
Sample C Male 43.3
Sample D Male 34.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 39.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 39.4
Samples: 4

Max nTPM: 41.5
Min nTPM: 36.6
Sample A Male 40.3
Sample B Male 36.6
Sample C Female 39.0
Sample D Female 41.5
Hippocampal formation
nTPM: 39.5
Samples: 4

Max nTPM: 40.7
Min nTPM: 38.4
Sample A Male 39.0
Sample B Male 38.4
Sample C Female 39.8
Sample D Female 40.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.2
638705 Antisense, RP_040831_02_C02, Mouse strain C57BL/6J (56 days, male) 1.2

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The Human Protein Atlas

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