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AMYGDALA - Expression summary
Mouse brain, Intensity
Amygdalai 		123.671
RNA expressioni
Consensus:40.2 nTPM
HPA:40.2 nTPM
GTEx:38.4 nTPM
FANTOM5:125.9 Scaled Tags Per Million
Pig:20.4 nTPM
Mouse:41.7 nTPM
Allen mouse:0.4 Expression energy

AMYGDALA - Mouse brain profilei , antibody HPA024470
Amygdala mean intensity 123.671
intensityi
FRONT BACK
Nucleus of the lateral olfactory tract 63.047
Basal medial amygdaloid nucleus 110.536
Basal lateral amygdala* -
Basal lateral amygdaloid nucleus 75.210
Cortical amygdala 100.808
Central amygdala 89.467
Medial amygdaloid nucleus 107.270

AMYGDALA - HPA Brain RNA-seq
Max nTPM 40.2
Sample id Sample description nTPM
Amygdala
nTPM: 40.1
2695 Female, age 67, right hemisphere 43.8
2814 Male, age 76, right hemisphere 40.9
1987 Female, age 91, left hemisphere 39.8
2514 Male, age 75, right hemisphere 38.3
2517 Female, age 94, left hemisphere 37.9
Basal amygdala
nTPM: 37.3
2609 Male, age 75, right hemisphere 42.9
2110 Male, age 80, left hemisphere 40.3
1955 Male, age 76, both hemispheres 38.6
2243 Female, age 91, right hemisphere 35.7
2685 Female, age 94, left hemisphere 35.6
2827 Female, age 67, right hemisphere 30.9
Central amygdala
nTPM: 40.2
1905 Male, age 76, both hemispheres 45.3
2515 Male, age 75, right hemisphere 42.8
2826 Female, age 94, left hemisphere 38.1
2239 Male, age 80, left hemisphere 37.8
2701 Female, age 91, right hemisphere 37.2
Corticomedial amygdala
nTPM: 37.0
2428 Male, age 75, right hemisphere 42.0
2829 Male, age 80, left hemisphere 39.1
2240 Male, age 76, both hemispheres 38.6
2242 Female, age 91, right hemisphere 35.8
2429 Female, age 94, left hemisphere 34.4
2535 Female, age 67, right hemisphere 32.3
Lateral amygdala
nTPM: 38.3
2516 Male, age 75, right hemisphere 41.5
2256 Male, age 80, left hemisphere 41.3
2255 Female, age 91, right hemisphere 39.1
1883 Male, age 76, both hemispheres 38.8
2534 Female, age 94, left hemisphere 35.6
2830 Female, age 67, right hemisphere 33.3
Stria terminalis, bed nucleus
nTPM: 31.3
2201 Male, age 74, unknown 34.6
2486 Female, age 94, both hemispheres 29.8
1974 Female, age 91, both hemispheres 29.4

AMYGDALA - GTEx RNA-seqi
Average nTPM 38.4
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 38.4
Samples: 152

Max nTPM: 85.6
Min nTPM: 19.2
Std nTPM: 10.8
Median nTPM: 36.4
GTEX-13OVJ-0011-R4b-SM-5P9H5 50-59 years, female 85.6
GTEX-NL3H-0011-R4a-SM-2I3GK 60-69 years, male 81.6
GTEX-1CB4J-0011-R4b-SM-9WG5P 60-69 years, male 73.3
GTEX-13NYS-0011-R4b-SM-5MR3O 60-69 years, male 64.0
GTEX-13OW5-0011-R4b-SM-5L3HS 60-69 years, male 63.9
GTEX-13NYB-0011-R4b-SM-9QEGJ 40-49 years, male 63.1
GTEX-1HB9E-0011-R4b-SM-ARZLS 50-59 years, male 62.9
GTEX-145MI-0011-R4b-SM-5PNZH 60-69 years, female 62.3
GTEX-13FLV-0011-R4a-SM-5LZYU 50-59 years, male 57.9
GTEX-1J8EW-0011-R4b-SM-ARU89 60-69 years, female 57.0
GTEX-NPJ8-0011-R4a-SM-2HML3 40-49 years, male 55.3
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AMYGDALA - FANTOM5 CAGEi
Max Scaled Tags Per Million 125.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 125.9
FF:10151-102I7 76 years, female 125.9

AMYGDALA - Pig RNA-seqi
Average nTPM 20.4
Pig sample Sample description nTPM
Amygdala
nTPM: 20.4
Samples: 4

Max nTPM: 22.5
Min nTPM: 17.2
Sample A Female 21.4
Sample B Female 22.5
Sample C Male 20.4
Sample D Male 17.2

AMYGDALA - Mouse RNA-seqi
Average nTPM 41.7
Mouse sample Sample description nTPM
Amygdala
nTPM: 41.7
Samples: 4

Max nTPM: 47.5
Min nTPM: 36.4
Sample A Male 41.5
Sample B Male 36.4
Sample C Female 47.5
Sample D Female 41.3

AMYGDALA - Allen Mouse ISHi
Max Expression energy 0.4
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 0.4
73817430 Antisense, RP_051101_01_A05, Mouse strain C57BL/6J (56 days, male) 0.6
77798987 Antisense, RP_070212_03_A11, Mouse strain C57BL/6J (56 days, male) 0.5
69540345 Antisense, RP_050426_01_E10, Mouse strain C57BL/6J (56 days, male) 0.1

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.