ABOUTMENU
HELP
NEWS
CFAP36
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Not detected
RNA expressioni
Consensus:75.0 nTPM
HPA:75.0 nTPM
GTEx:73.7 nTPM
FANTOM5:113.3 Scaled Tags Per Million
Pig:20.6 nTPM
Mouse:100.8 nTPM
Allen mouse:15.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA008994Antibody HPA017061
Glial cells Not detectedHigh
Neuronal cells Not detectedLow





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 75.0
Sample id Sample description nTPM
Hippocampus
nTPM: 66.4
1898 Male, age 80, left hemisphere 70.8
2621 Female, age 67, right hemisphere 67.1
2529 Female, age 94, left hemisphere 66.9
2148 Female, age 91, left hemisphere 66.0
1855 Male, age 76, left hemisphere 63.7
1911 Female, age 85, right hemisphere 63.6
Dentate gyrus
nTPM: 67.9
1927 Female, age 91, both hemispheres 75.1
2246 Female, age 85, both hemispheres 69.0
2531 Female, age 67, both hemispheres 68.4
2010 Male, age 76, both hemispheres 66.0
2528 Male, age 74, both hemispheres 65.6
2530 Female, age 94, left hemisphere 63.1
Entorhinal gyrus
nTPM: 66.7
2613 Female, age 94, left hemisphere 69.3
2764 Male, age 80, right hemisphere 68.4
1938 Female, age 85, left hemisphere 68.3
1787 Male, age 76, left hemisphere 66.1
2686 Male, age 75, right hemisphere 65.4
2117 Female, age 91, right hemisphere 62.6
Hippocampus, CA1
nTPM: 70.0
2749 Male, age 80, left hemisphere 79.4
1873 Female, age 85, both hemispheres 68.7
2527 Male, age 74, both hemispheres 67.9
2045 Male, age 76, both hemispheres 67.5
2082 Female, age 91, right hemisphere 66.3
Hippocampus, CA2
nTPM: 68.7
1892 Male, age 76, both hemispheres 73.9
2249 Male, age 74, both hemispheres 70.4
1963 Male, age 80, left hemisphere 70.1
1940 Female, age 85, left hemisphere 67.8
2113 Female, age 91, right hemisphere 66.9
2437 Female, age 94, left hemisphere 63.0
Hippocampus, CA3
nTPM: 69.0
2137 Male, age 80, left hemisphere 76.8
2436 Male, age 74, both hemispheres 70.1
1867 Male, age 76, both hemispheres 69.4
2620 Female, age 94, left hemisphere 67.8
1891 Female, age 85, both hemispheres 67.5
2861 Female, age 67, both hemispheres 62.2
Parahippocampal cortex
nTPM: 70.1
1850 Male, age 80, both hemispheres 76.0
2693 Female, age 94, both hemispheres 74.8
2245 Female, age 91, both hemispheres 72.5
2250 Female, age 67, right hemisphere 71.3
2532 Female, age 72, left hemisphere 70.7
1990 Female, age 91, right hemisphere 70.6
1933 Female, age 85, both hemispheres 68.3
2692 Male, age 74, both hemispheres 65.8
2622 Female, age 67, right hemisphere 65.7
2018 Male, age 76, both hemispheres 65.0
Perirhinal gyrus
nTPM: 75.0
1847 Female, age 91, left hemisphere 77.5
2521 Female, age 94, right hemisphere 76.3
1841 Female, age 85, right hemisphere 76.0
1794 Male, age 80, right hemisphere 73.3
2848 Male, age 76, right hemisphere 71.8
Subiculum
nTPM: 65.1
1901 Male, age 80, both hemispheres 69.0
1977 Female, age 85, both hemispheres 68.6
2619 Male, age 74, both hemispheres 64.8
2729 Female, age 91, right hemisphere 63.6
2438 Female, age 94, left hemisphere 63.0
2042 Male, age 76, both hemispheres 61.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 73.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 73.7
Samples: 197

Max nTPM: 177.3
Min nTPM: 31.0
Std nTPM: 22.3
Median nTPM: 71.0
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 177.3
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 140.1
GTEX-TSE9-0011-R1A-SM-3DB7E 60-69 years, female 132.6
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 128.3
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 127.8
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 124.3
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 124.3
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 122.4
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 117.0
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 113.9
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 113.0
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 113.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 113.3
FF:10169-103B7 60 years, female 132.8
FF:10153-102I9 76 years, female 93.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 20.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 20.7
Samples: 4

Max nTPM: 24.2
Min nTPM: 17.6
Sample A Female 24.2
Sample B Female 20.7
Sample C Male 20.1
Sample D Male 17.6
Entorhinal cortex
nTPM: 19.5
Samples: 4

Max nTPM: 21.8
Min nTPM: 17.8
Sample A Female 20.3
Sample B Female 21.8
Sample C Male 18.2
Sample D Male 17.8
Subiculum
nTPM: 18.0
Samples: 4

Max nTPM: 22.6
Min nTPM: 15.7
Sample A Female 22.6
Sample B Female 15.7
Sample C Male 17.1
Sample D Male 16.4
Ventral hippocampus
nTPM: 17.9
Samples: 4

Max nTPM: 20.8
Min nTPM: 15.7
Sample A Female 20.8
Sample B Female 15.7
Sample C Male 15.7
Sample D Male 19.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 100.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 98.0
Samples: 4

Max nTPM: 106.4
Min nTPM: 89.0
Sample A Male 93.1
Sample B Male 106.4
Sample C Female 103.5
Sample D Female 89.0
Hippocampal formation
nTPM: 100.8
Samples: 4

Max nTPM: 107.7
Min nTPM: 91.7
Sample A Male 107.7
Sample B Male 103.2
Sample C Female 100.6
Sample D Female 91.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 15.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 15.5
76081944 Antisense, RP_060626_01_B04, Mouse strain C57BL/6J (56 days, male) 15.5

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.