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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: High
RNA expressioni
Consensus:135.2 nTPM
HPA:135.2 nTPM
GTEx:146.8 nTPM
FANTOM5:196.1 Scaled Tags Per Million
Pig:144.2 nTPM
Mouse:425.3 nTPM
Allen mouse:13.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA008352Antibody CAB001994
Glial cells LowLow
Neuronal cells HighLow




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 135.2
Sample id Sample description nTPM
Hippocampus
nTPM: 123.1
1898 Male, age 80, left hemisphere 134.1
1855 Male, age 76, left hemisphere 128.7
2621 Female, age 67, right hemisphere 127.2
1911 Female, age 85, right hemisphere 120.0
2529 Female, age 94, left hemisphere 115.3
2148 Female, age 91, left hemisphere 113.4
Dentate gyrus
nTPM: 123.0
2010 Male, age 76, both hemispheres 134.7
1927 Female, age 91, both hemispheres 133.0
2530 Female, age 94, left hemisphere 124.7
2246 Female, age 85, both hemispheres 119.4
2531 Female, age 67, both hemispheres 114.5
2528 Male, age 74, both hemispheres 111.9
Entorhinal gyrus
nTPM: 115.1
1938 Female, age 85, left hemisphere 124.8
1787 Male, age 76, left hemisphere 121.2
2764 Male, age 80, right hemisphere 113.5
2117 Female, age 91, right hemisphere 111.9
2613 Female, age 94, left hemisphere 110.1
2686 Male, age 75, right hemisphere 109.1
Hippocampus, CA1
nTPM: 135.2
2749 Male, age 80, left hemisphere 186.7
2045 Male, age 76, both hemispheres 127.0
1873 Female, age 85, both hemispheres 126.8
2527 Male, age 74, both hemispheres 125.2
2082 Female, age 91, right hemisphere 110.2
Hippocampus, CA2
nTPM: 126.0
1892 Male, age 76, both hemispheres 148.9
1963 Male, age 80, left hemisphere 132.7
2249 Male, age 74, both hemispheres 125.4
2437 Female, age 94, left hemisphere 119.2
1940 Female, age 85, left hemisphere 117.4
2113 Female, age 91, right hemisphere 112.5
Hippocampus, CA3
nTPM: 131.0
2137 Male, age 80, left hemisphere 172.7
1867 Male, age 76, both hemispheres 142.3
2436 Male, age 74, both hemispheres 124.7
1891 Female, age 85, both hemispheres 116.2
2620 Female, age 94, left hemisphere 116.2
2861 Female, age 67, both hemispheres 113.6
Parahippocampal cortex
nTPM: 116.7
2245 Female, age 91, both hemispheres 125.8
2250 Female, age 67, right hemisphere 123.9
2018 Male, age 76, both hemispheres 123.6
1850 Male, age 80, both hemispheres 119.3
1933 Female, age 85, both hemispheres 118.9
2532 Female, age 72, left hemisphere 115.3
1990 Female, age 91, right hemisphere 115.0
2693 Female, age 94, both hemispheres 112.6
2692 Male, age 74, both hemispheres 107.5
2622 Female, age 67, right hemisphere 105.1
Perirhinal gyrus
nTPM: 124.3
1847 Female, age 91, left hemisphere 133.4
2848 Male, age 76, right hemisphere 123.5
2521 Female, age 94, right hemisphere 123.0
1841 Female, age 85, right hemisphere 122.1
1794 Male, age 80, right hemisphere 119.3
Subiculum
nTPM: 120.8
2042 Male, age 76, both hemispheres 133.2
1901 Male, age 80, both hemispheres 133.1
1977 Female, age 85, both hemispheres 123.2
2438 Female, age 94, left hemisphere 116.9
2729 Female, age 91, right hemisphere 109.7
2619 Male, age 74, both hemispheres 108.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 146.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 146.8
Samples: 197

Max nTPM: 313.6
Min nTPM: 70.8
Std nTPM: 41.3
Median nTPM: 140.1
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 313.6
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 283.8
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 282.9
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 268.4
GTEX-11EI6-0011-R1a-SM-DO93L 60-69 years, male 241.9
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 241.2
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 240.2
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 237.4
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 233.6
GTEX-1F6I4-0011-R1a-SM-9OSWU 60-69 years, male 229.8
GTEX-1A3MX-0011-R1b-SM-7P8PH 60-69 years, male 224.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 196.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 196.1
FF:10169-103B7 60 years, female 272.0
FF:10153-102I9 76 years, female 120.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 144.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 144.2
Samples: 4

Max nTPM: 195.5
Min nTPM: 111.7
Sample A Female 195.5
Sample B Female 148.7
Sample C Male 111.7
Sample D Male 120.8
Entorhinal cortex
nTPM: 80.9
Samples: 4

Max nTPM: 89.3
Min nTPM: 65.6
Sample A Female 89.3
Sample B Female 85.4
Sample C Male 83.3
Sample D Male 65.6
Subiculum
nTPM: 86.1
Samples: 4

Max nTPM: 111.7
Min nTPM: 76.7
Sample A Female 111.7
Sample B Female 77.5
Sample C Male 76.7
Sample D Male 78.5
Ventral hippocampus
nTPM: 115.6
Samples: 4

Max nTPM: 169.8
Min nTPM: 80.2
Sample A Female 107.6
Sample B Female 80.2
Sample C Male 104.6
Sample D Male 169.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 425.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 261.1
Samples: 4

Max nTPM: 287.0
Min nTPM: 248.7
Sample A Male 248.7
Sample B Male 253.7
Sample C Female 287.0
Sample D Female 255.1
Hippocampal formation
nTPM: 425.3
Samples: 4

Max nTPM: 495.8
Min nTPM: 371.0
Sample A Male 397.7
Sample B Male 436.8
Sample C Female 495.8
Sample D Female 371.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 13.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 13.9
69526892 Antisense, RP_050421_01_H01, Mouse strain C57BL/6J (56 days, male) 13.9

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The Human Protein Atlas

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