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CCT3
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: Medium
RNA expressioni
Consensus:125.3 nTPM
HPA:125.3 nTPM
GTEx:63.9 nTPM
FANTOM5:123.1 Scaled Tags Per Million
Pig:69.5 nTPM
Mouse:149.1 nTPM
Allen mouse:6.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA006543
Glial cells High
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 125.3
Sample id Sample description nTPM
Hippocampus
nTPM: 120.6
1898 Male, age 80, left hemisphere 129.1
2529 Female, age 94, left hemisphere 123.4
1855 Male, age 76, left hemisphere 118.3
1911 Female, age 85, right hemisphere 118.1
2621 Female, age 67, right hemisphere 117.8
2148 Female, age 91, left hemisphere 116.9
Dentate gyrus
nTPM: 121.7
1927 Female, age 91, both hemispheres 127.6
2010 Male, age 76, both hemispheres 125.7
2528 Male, age 74, both hemispheres 123.0
2530 Female, age 94, left hemisphere 120.3
2246 Female, age 85, both hemispheres 119.0
2531 Female, age 67, both hemispheres 114.7
Entorhinal gyrus
nTPM: 118.8
1938 Female, age 85, left hemisphere 125.6
2764 Male, age 80, right hemisphere 122.9
1787 Male, age 76, left hemisphere 122.0
2117 Female, age 91, right hemisphere 119.4
2613 Female, age 94, left hemisphere 112.0
2686 Male, age 75, right hemisphere 111.1
Hippocampus, CA1
nTPM: 125.3
2749 Male, age 80, left hemisphere 136.9
1873 Female, age 85, both hemispheres 128.0
2045 Male, age 76, both hemispheres 123.9
2527 Male, age 74, both hemispheres 121.5
2082 Female, age 91, right hemisphere 116.3
Hippocampus, CA2
nTPM: 123.9
1892 Male, age 76, both hemispheres 134.4
2249 Male, age 74, both hemispheres 128.4
1963 Male, age 80, left hemisphere 128.1
1940 Female, age 85, left hemisphere 119.2
2437 Female, age 94, left hemisphere 118.2
2113 Female, age 91, right hemisphere 115.2
Hippocampus, CA3
nTPM: 122.0
2436 Male, age 74, both hemispheres 129.0
1867 Male, age 76, both hemispheres 127.2
2137 Male, age 80, left hemisphere 125.8
1891 Female, age 85, both hemispheres 122.4
2620 Female, age 94, left hemisphere 116.4
2861 Female, age 67, both hemispheres 111.2
Parahippocampal cortex
nTPM: 117.3
1850 Male, age 80, both hemispheres 125.0
1990 Female, age 91, right hemisphere 123.0
1933 Female, age 85, both hemispheres 122.7
2250 Female, age 67, right hemisphere 119.0
2018 Male, age 76, both hemispheres 118.2
2532 Female, age 72, left hemisphere 117.8
2245 Female, age 91, both hemispheres 117.0
2693 Female, age 94, both hemispheres 113.0
2692 Male, age 74, both hemispheres 109.8
2622 Female, age 67, right hemisphere 107.7
Perirhinal gyrus
nTPM: 122.8
1847 Female, age 91, left hemisphere 129.7
1841 Female, age 85, right hemisphere 126.2
1794 Male, age 80, right hemisphere 124.3
2848 Male, age 76, right hemisphere 117.6
2521 Female, age 94, right hemisphere 116.1
Subiculum
nTPM: 120.2
1977 Female, age 85, both hemispheres 126.3
1901 Male, age 80, both hemispheres 123.8
2042 Male, age 76, both hemispheres 119.1
2619 Male, age 74, both hemispheres 118.0
2729 Female, age 91, right hemisphere 117.8
2438 Female, age 94, left hemisphere 116.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 63.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 63.9
Samples: 197

Max nTPM: 176.4
Min nTPM: 24.6
Std nTPM: 18.6
Median nTPM: 61.0
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 176.4
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 144.9
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 144.3
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 125.1
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 108.3
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 104.8
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 104.8
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 101.3
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 100.4
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 94.3
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 90.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 123.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 123.1
FF:10153-102I9 76 years, female 125.0
FF:10169-103B7 60 years, female 121.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 69.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 69.4
Samples: 4

Max nTPM: 88.5
Min nTPM: 53.9
Sample A Female 88.5
Sample B Female 68.9
Sample C Male 66.4
Sample D Male 53.9
Entorhinal cortex
nTPM: 62.0
Samples: 4

Max nTPM: 75.1
Min nTPM: 49.6
Sample A Female 63.0
Sample B Female 75.1
Sample C Male 60.2
Sample D Male 49.6
Subiculum
nTPM: 60.7
Samples: 4

Max nTPM: 78.5
Min nTPM: 53.2
Sample A Female 78.5
Sample B Female 57.6
Sample C Male 53.5
Sample D Male 53.2
Ventral hippocampus
nTPM: 63.3
Samples: 4

Max nTPM: 71.6
Min nTPM: 50.3
Sample A Female 66.4
Sample B Female 50.3
Sample C Male 71.6
Sample D Male 64.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 149.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 132.4
Samples: 4

Max nTPM: 144.8
Min nTPM: 120.8
Sample A Male 120.8
Sample B Male 128.2
Sample C Female 144.8
Sample D Female 135.7
Hippocampal formation
nTPM: 149.2
Samples: 4

Max nTPM: 160.9
Min nTPM: 136.3
Sample A Male 160.9
Sample B Male 136.3
Sample C Female 151.1
Sample D Female 148.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 6.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.4
69540543 Antisense, RP_050426_01_H12, Mouse strain C57BL/6J (56 days, male) 6.4

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