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CLASP2
HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:44.8 nTPM
HPA:44.8 nTPM
GTEx:44.1 nTPM
FANTOM5:171.7 Scaled Tags Per Million
Pig:116.2 nTPM
Mouse:98.1 nTPM
Allen mouse:4.0 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 44.8
Sample id Sample description nTPM
Hippocampus
nTPM: 25.6
1898 Male, age 80, left hemisphere 35.1
1911 Female, age 85, right hemisphere 31.2
2529 Female, age 94, left hemisphere 27.4
2621 Female, age 67, right hemisphere 26.8
2148 Female, age 91, left hemisphere 18.5
1855 Male, age 76, left hemisphere 14.7
Dentate gyrus
nTPM: 31.1
2528 Male, age 74, both hemispheres 36.2
2530 Female, age 94, left hemisphere 34.0
2010 Male, age 76, both hemispheres 33.9
1927 Female, age 91, both hemispheres 33.5
2246 Female, age 85, both hemispheres 25.1
2531 Female, age 67, both hemispheres 24.1
Entorhinal gyrus
nTPM: 38.2
2117 Female, age 91, right hemisphere 56.0
2764 Male, age 80, right hemisphere 52.2
1938 Female, age 85, left hemisphere 39.4
1787 Male, age 76, left hemisphere 33.8
2613 Female, age 94, left hemisphere 32.5
2686 Male, age 75, right hemisphere 15.6
Hippocampus, CA1
nTPM: 32.6
2749 Male, age 80, left hemisphere 55.3
1873 Female, age 85, both hemispheres 34.3
2527 Male, age 74, both hemispheres 33.5
2082 Female, age 91, right hemisphere 25.2
2045 Male, age 76, both hemispheres 14.5
Hippocampus, CA2
nTPM: 37.8
1963 Male, age 80, left hemisphere 52.2
1892 Male, age 76, both hemispheres 43.5
2249 Male, age 74, both hemispheres 43.4
2437 Female, age 94, left hemisphere 37.7
2113 Female, age 91, right hemisphere 28.7
1940 Female, age 85, left hemisphere 21.3
Hippocampus, CA3
nTPM: 23.1
1891 Female, age 85, both hemispheres 46.3
1867 Male, age 76, both hemispheres 34.1
2137 Male, age 80, left hemisphere 29.7
2436 Male, age 74, both hemispheres 21.5
2620 Female, age 94, left hemisphere 7.1
2861 Female, age 67, both hemispheres 0.0
Parahippocampal cortex
nTPM: 35.1
1850 Male, age 80, both hemispheres 56.1
1990 Female, age 91, right hemisphere 48.2
2532 Female, age 72, left hemisphere 47.8
1933 Female, age 85, both hemispheres 38.2
2693 Female, age 94, both hemispheres 37.4
2692 Male, age 74, both hemispheres 35.6
2245 Female, age 91, both hemispheres 30.6
2018 Male, age 76, both hemispheres 28.6
2250 Female, age 67, right hemisphere 23.2
2622 Female, age 67, right hemisphere 5.3
Perirhinal gyrus
nTPM: 44.7
1794 Male, age 80, right hemisphere 58.3
2521 Female, age 94, right hemisphere 47.1
1841 Female, age 85, right hemisphere 43.1
1847 Female, age 91, left hemisphere 39.6
2848 Male, age 76, right hemisphere 35.6
Subiculum
nTPM: 44.8
1977 Female, age 85, both hemispheres 57.6
1901 Male, age 80, both hemispheres 57.2
2438 Female, age 94, left hemisphere 46.7
2619 Male, age 74, both hemispheres 43.2
2042 Male, age 76, both hemispheres 42.2
2729 Female, age 91, right hemisphere 21.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 44.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 44.1
Samples: 197

Max nTPM: 92.1
Min nTPM: 18.2
Std nTPM: 13.0
Median nTPM: 43.1
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 92.1
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 82.8
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 81.9
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 77.7
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 71.7
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 70.2
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 68.8
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 68.3
GTEX-1E2YA-0011-R1b-SM-CJI29 50-59 years, male 66.8
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 66.5
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 66.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 171.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 171.7
FF:10153-102I9 76 years, female 185.5
FF:10169-103B7 60 years, female 157.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 116.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 116.2
Samples: 4

Max nTPM: 139.8
Min nTPM: 89.0
Sample A Female 139.8
Sample B Female 112.5
Sample C Male 123.4
Sample D Male 89.0
Entorhinal cortex
nTPM: 111.4
Samples: 4

Max nTPM: 132.9
Min nTPM: 99.6
Sample A Female 104.0
Sample B Female 132.9
Sample C Male 109.2
Sample D Male 99.6
Subiculum
nTPM: 107.2
Samples: 4

Max nTPM: 131.3
Min nTPM: 94.7
Sample A Female 131.3
Sample B Female 106.6
Sample C Male 94.7
Sample D Male 96.0
Ventral hippocampus
nTPM: 100.0
Samples: 4

Max nTPM: 112.0
Min nTPM: 89.1
Sample A Female 112.0
Sample B Female 89.1
Sample C Male 95.2
Sample D Male 103.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 98.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 98.1
Samples: 4

Max nTPM: 103.7
Min nTPM: 94.3
Sample A Male 98.5
Sample B Male 95.8
Sample C Female 94.3
Sample D Female 103.7
Hippocampal formation
nTPM: 86.2
Samples: 4

Max nTPM: 89.8
Min nTPM: 83.0
Sample A Male 84.8
Sample B Male 87.3
Sample C Female 89.8
Sample D Female 83.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 4.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.0
71211477 Antisense, RP_050816_01_F10, Mouse strain C57BL/6J (56 days, male) 6.5
71724852 Antisense, RP_050921_01_H01, Mouse strain C57BL/6J (56 days, male) 1.5

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