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IFI16
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Not detected
RNA expressioni
Consensus:13.7 nTPM
HPA:13.7 nTPM
GTEx:13.4 nTPM
FANTOM5:101.8 Scaled Tags Per Million
Pig:5.1 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA002134Antibody CAB016293
Glial cells LowNot detected
Neuronal cells Not detectedNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 13.7
Sample id Sample description nTPM
Hippocampus
nTPM: 13.2
1855 Male, age 76, left hemisphere 15.8
1898 Male, age 80, left hemisphere 14.0
2621 Female, age 67, right hemisphere 13.9
1911 Female, age 85, right hemisphere 12.8
2529 Female, age 94, left hemisphere 11.8
2148 Female, age 91, left hemisphere 10.6
Dentate gyrus
nTPM: 11.4
2530 Female, age 94, left hemisphere 12.4
2531 Female, age 67, both hemispheres 12.4
2010 Male, age 76, both hemispheres 12.3
2246 Female, age 85, both hemispheres 11.8
2528 Male, age 74, both hemispheres 11.8
1927 Female, age 91, both hemispheres 7.8
Entorhinal gyrus
nTPM: 11.6
1787 Male, age 76, left hemisphere 15.7
2117 Female, age 91, right hemisphere 15.3
2686 Male, age 75, right hemisphere 12.0
2613 Female, age 94, left hemisphere 9.4
2764 Male, age 80, right hemisphere 8.7
1938 Female, age 85, left hemisphere 8.6
Hippocampus, CA1
nTPM: 11.2
2082 Female, age 91, right hemisphere 13.4
2045 Male, age 76, both hemispheres 12.2
2527 Male, age 74, both hemispheres 12.0
1873 Female, age 85, both hemispheres 11.7
2749 Male, age 80, left hemisphere 7.0
Hippocampus, CA2
nTPM: 11.9
2113 Female, age 91, right hemisphere 13.7
1940 Female, age 85, left hemisphere 12.9
2249 Male, age 74, both hemispheres 12.3
2437 Female, age 94, left hemisphere 11.7
1963 Male, age 80, left hemisphere 11.4
1892 Male, age 76, both hemispheres 9.7
Hippocampus, CA3
nTPM: 10.3
1891 Female, age 85, both hemispheres 13.2
1867 Male, age 76, both hemispheres 12.8
2861 Female, age 67, both hemispheres 11.6
2436 Male, age 74, both hemispheres 11.4
2137 Male, age 80, left hemisphere 6.7
2620 Female, age 94, left hemisphere 5.7
Parahippocampal cortex
nTPM: 11.3
2018 Male, age 76, both hemispheres 17.8
2250 Female, age 67, right hemisphere 14.1
2692 Male, age 74, both hemispheres 11.3
2693 Female, age 94, both hemispheres 10.6
2245 Female, age 91, both hemispheres 10.5
1850 Male, age 80, both hemispheres 10.3
1990 Female, age 91, right hemisphere 10.1
2532 Female, age 72, left hemisphere 9.9
1933 Female, age 85, both hemispheres 9.6
2622 Female, age 67, right hemisphere 8.5
Perirhinal gyrus
nTPM: 9.1
2848 Male, age 76, right hemisphere 11.1
2521 Female, age 94, right hemisphere 10.4
1847 Female, age 91, left hemisphere 8.6
1841 Female, age 85, right hemisphere 8.2
1794 Male, age 80, right hemisphere 7.1
Subiculum
nTPM: 13.7
2042 Male, age 76, both hemispheres 18.0
2729 Female, age 91, right hemisphere 15.5
2619 Male, age 74, both hemispheres 14.2
2438 Female, age 94, left hemisphere 12.3
1901 Male, age 80, both hemispheres 12.0
1977 Female, age 85, both hemispheres 10.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 13.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 13.4
Samples: 197

Max nTPM: 86.7
Min nTPM: 2.9
Std nTPM: 8.9
Median nTPM: 11.0
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 86.7
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 55.8
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 42.7
GTEX-1H1DG-0011-R1b-SM-CKZP1 70-79 years, male 37.0
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 32.2
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 31.4
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 31.2
GTEX-131YS-0011-R1a-SM-5DUXC 60-69 years, female 30.1
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 29.6
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 27.7
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 27.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 101.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 101.8
FF:10169-103B7 60 years, female 128.7
FF:10153-102I9 76 years, female 75.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 5.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 3.9
Samples: 4

Max nTPM: 5.2
Min nTPM: 2.5
Sample A Female 2.5
Sample B Female 3.5
Sample C Male 4.5
Sample D Male 5.2
Entorhinal cortex
nTPM: 5.1
Samples: 4

Max nTPM: 5.7
Min nTPM: 4.3
Sample A Female 5.5
Sample B Female 4.3
Sample C Male 5.7
Sample D Male 4.9
Subiculum
nTPM: 4.4
Samples: 4

Max nTPM: 5.3
Min nTPM: 2.7
Sample A Female 2.7
Sample B Female 4.4
Sample C Male 5.1
Sample D Male 5.3
Ventral hippocampus
nTPM: 4.3
Samples: 4

Max nTPM: 5.2
Min nTPM: 3.8
Sample A Female 4.5
Sample B Female 5.2
Sample C Male 3.8
Sample D Male 3.8

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.