ABOUTMENU
HELP
NEWS
GNL3
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:17.9 nTPM
HPA:17.9 nTPM
GTEx:19.5 nTPM
FANTOM5:85.0 Scaled Tags Per Million
Pig:11.8 nTPM
Mouse:17.9 nTPM
Allen mouse:1.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA036742Antibody HPA036743Antibody CAB020770
Glial cells LowMediumNot detected
Neuronal cells HighHighMedium







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 17.9
Sample id Sample description nTPM
Hippocampus
nTPM: 16.0
1898 Male, age 80, left hemisphere 17.0
1911 Female, age 85, right hemisphere 16.8
2621 Female, age 67, right hemisphere 16.8
2148 Female, age 91, left hemisphere 15.9
1855 Male, age 76, left hemisphere 15.4
2529 Female, age 94, left hemisphere 14.2
Dentate gyrus
nTPM: 16.2
2530 Female, age 94, left hemisphere 17.3
2010 Male, age 76, both hemispheres 16.3
1927 Female, age 91, both hemispheres 16.2
2246 Female, age 85, both hemispheres 15.9
2528 Male, age 74, both hemispheres 15.7
2531 Female, age 67, both hemispheres 15.5
Entorhinal gyrus
nTPM: 16.3
1938 Female, age 85, left hemisphere 16.9
2613 Female, age 94, left hemisphere 16.8
1787 Male, age 76, left hemisphere 16.7
2764 Male, age 80, right hemisphere 16.4
2686 Male, age 75, right hemisphere 16.2
2117 Female, age 91, right hemisphere 14.9
Hippocampus, CA1
nTPM: 16.4
2749 Male, age 80, left hemisphere 18.1
2045 Male, age 76, both hemispheres 17.2
2082 Female, age 91, right hemisphere 15.7
1873 Female, age 85, both hemispheres 15.6
2527 Male, age 74, both hemispheres 15.4
Hippocampus, CA2
nTPM: 15.2
1892 Male, age 76, both hemispheres 16.9
1963 Male, age 80, left hemisphere 15.4
2113 Female, age 91, right hemisphere 15.1
2249 Male, age 74, both hemispheres 15.0
1940 Female, age 85, left hemisphere 14.7
2437 Female, age 94, left hemisphere 14.2
Hippocampus, CA3
nTPM: 16.4
1867 Male, age 76, both hemispheres 17.4
2436 Male, age 74, both hemispheres 17.1
2137 Male, age 80, left hemisphere 16.7
1891 Female, age 85, both hemispheres 16.2
2620 Female, age 94, left hemisphere 15.6
2861 Female, age 67, both hemispheres 15.1
Parahippocampal cortex
nTPM: 17.0
1850 Male, age 80, both hemispheres 18.6
1933 Female, age 85, both hemispheres 17.9
2532 Female, age 72, left hemisphere 17.8
2692 Male, age 74, both hemispheres 17.0
2250 Female, age 67, right hemisphere 16.8
2693 Female, age 94, both hemispheres 16.8
2245 Female, age 91, both hemispheres 16.7
2018 Male, age 76, both hemispheres 16.6
1990 Female, age 91, right hemisphere 16.3
2622 Female, age 67, right hemisphere 15.0
Perirhinal gyrus
nTPM: 17.9
2521 Female, age 94, right hemisphere 18.1
2848 Male, age 76, right hemisphere 18.1
1794 Male, age 80, right hemisphere 18.0
1847 Female, age 91, left hemisphere 18.0
1841 Female, age 85, right hemisphere 17.2
Subiculum
nTPM: 15.6
1901 Male, age 80, both hemispheres 16.9
2042 Male, age 76, both hemispheres 16.7
1977 Female, age 85, both hemispheres 16.4
2619 Male, age 74, both hemispheres 16.0
2729 Female, age 91, right hemisphere 14.0
2438 Female, age 94, left hemisphere 13.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 19.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 19.5
Samples: 197

Max nTPM: 42.6
Min nTPM: 12.0
Std nTPM: 4.3
Median nTPM: 19.1
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 42.6
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 36.1
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 33.6
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 29.8
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 28.4
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 27.6
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 26.8
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 26.7
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 26.6
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 26.5
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 26.2
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 85.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 85.0
FF:10169-103B7 60 years, female 116.1
FF:10153-102I9 76 years, female 54.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 11.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 11.9
Samples: 4

Max nTPM: 14.1
Min nTPM: 10.5
Sample A Female 14.1
Sample B Female 11.8
Sample C Male 11.0
Sample D Male 10.5
Entorhinal cortex
nTPM: 10.1
Samples: 4

Max nTPM: 11.1
Min nTPM: 8.7
Sample A Female 10.4
Sample B Female 11.1
Sample C Male 10.2
Sample D Male 8.7
Subiculum
nTPM: 10.2
Samples: 4

Max nTPM: 12.7
Min nTPM: 9.2
Sample A Female 12.7
Sample B Female 9.3
Sample C Male 9.2
Sample D Male 9.5
Ventral hippocampus
nTPM: 9.8
Samples: 4

Max nTPM: 11.1
Min nTPM: 8.4
Sample A Female 11.0
Sample B Female 8.7
Sample C Male 8.4
Sample D Male 11.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 17.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 15.8
Samples: 4

Max nTPM: 17.5
Min nTPM: 12.5
Sample A Male 17.5
Sample B Male 17.3
Sample C Female 15.8
Sample D Female 12.5
Hippocampal formation
nTPM: 17.9
Samples: 4

Max nTPM: 21.3
Min nTPM: 13.8
Sample A Male 21.3
Sample B Male 18.7
Sample C Female 13.8
Sample D Female 17.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.5
68191306 Antisense, RP_041123_02_C10, Mouse strain C57BL/6J (56 days, male) 1.5

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.