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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:17.7 nTPM
HPA:17.7 nTPM
GTEx:16.0 nTPM
FANTOM5:32.6 Scaled Tags Per Million
Pig:9.1 nTPM
Mouse:12.3 nTPM
Allen mouse:0.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA029700Antibody HPA029701Antibody HPA029702Antibody HPA029703
Glial cells Not detectedNot detectedNot detectedNot detected
Neuronal cells Not detectedNot detectedNot detectedHigh








HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 17.7
Sample id Sample description nTPM
Hippocampus
nTPM: 16.4
1898 Male, age 80, left hemisphere 20.6
2529 Female, age 94, left hemisphere 16.7
2621 Female, age 67, right hemisphere 16.1
2148 Female, age 91, left hemisphere 16.0
1855 Male, age 76, left hemisphere 14.7
1911 Female, age 85, right hemisphere 14.1
Dentate gyrus
nTPM: 16.0
2530 Female, age 94, left hemisphere 17.7
2528 Male, age 74, both hemispheres 17.6
1927 Female, age 91, both hemispheres 16.6
2246 Female, age 85, both hemispheres 16.1
2010 Male, age 76, both hemispheres 15.0
2531 Female, age 67, both hemispheres 13.2
Entorhinal gyrus
nTPM: 17.2
2764 Male, age 80, right hemisphere 19.5
2613 Female, age 94, left hemisphere 18.6
1787 Male, age 76, left hemisphere 16.6
2686 Male, age 75, right hemisphere 16.5
1938 Female, age 85, left hemisphere 16.3
2117 Female, age 91, right hemisphere 15.7
Hippocampus, CA1
nTPM: 17.2
2749 Male, age 80, left hemisphere 25.1
2527 Male, age 74, both hemispheres 18.1
1873 Female, age 85, both hemispheres 16.8
2082 Female, age 91, right hemisphere 14.8
2045 Male, age 76, both hemispheres 11.0
Hippocampus, CA2
nTPM: 17.4
1963 Male, age 80, left hemisphere 21.5
1892 Male, age 76, both hemispheres 18.4
2249 Male, age 74, both hemispheres 17.6
1940 Female, age 85, left hemisphere 15.9
2113 Female, age 91, right hemisphere 15.4
2437 Female, age 94, left hemisphere 15.4
Hippocampus, CA3
nTPM: 16.6
2436 Male, age 74, both hemispheres 21.4
2137 Male, age 80, left hemisphere 19.6
2620 Female, age 94, left hemisphere 15.6
1867 Male, age 76, both hemispheres 14.9
1891 Female, age 85, both hemispheres 14.4
2861 Female, age 67, both hemispheres 14.1
Parahippocampal cortex
nTPM: 16.6
2622 Female, age 67, right hemisphere 17.8
2693 Female, age 94, both hemispheres 17.5
2250 Female, age 67, right hemisphere 17.3
2245 Female, age 91, both hemispheres 17.2
2692 Male, age 74, both hemispheres 17.2
1850 Male, age 80, both hemispheres 17.1
1990 Female, age 91, right hemisphere 16.8
1933 Female, age 85, both hemispheres 16.0
2532 Female, age 72, left hemisphere 15.3
2018 Male, age 76, both hemispheres 13.6
Perirhinal gyrus
nTPM: 17.7
1847 Female, age 91, left hemisphere 20.6
2521 Female, age 94, right hemisphere 18.4
1794 Male, age 80, right hemisphere 18.3
2848 Male, age 76, right hemisphere 16.0
1841 Female, age 85, right hemisphere 15.3
Subiculum
nTPM: 16.4
2619 Male, age 74, both hemispheres 18.7
1977 Female, age 85, both hemispheres 17.7
1901 Male, age 80, both hemispheres 17.3
2729 Female, age 91, right hemisphere 16.2
2438 Female, age 94, left hemisphere 14.6
2042 Male, age 76, both hemispheres 14.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 16.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 16.0
Samples: 197

Max nTPM: 25.7
Min nTPM: 4.4
Std nTPM: 4.1
Median nTPM: 15.4
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 25.7
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 25.5
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 25.3
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 24.7
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 24.5
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 24.2
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 24.0
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 24.0
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 23.9
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 23.8
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 23.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 32.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 32.6
FF:10153-102I9 76 years, female 32.8
FF:10169-103B7 60 years, female 32.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 9.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 9.1
Samples: 4

Max nTPM: 10.9
Min nTPM: 6.8
Sample A Female 10.9
Sample B Female 9.0
Sample C Male 9.7
Sample D Male 6.8
Entorhinal cortex
nTPM: 7.7
Samples: 4

Max nTPM: 8.3
Min nTPM: 6.6
Sample A Female 8.0
Sample B Female 8.3
Sample C Male 8.0
Sample D Male 6.6
Subiculum
nTPM: 9.0
Samples: 4

Max nTPM: 10.8
Min nTPM: 7.5
Sample A Female 10.8
Sample B Female 8.6
Sample C Male 9.0
Sample D Male 7.5
Ventral hippocampus
nTPM: 9.0
Samples: 4

Max nTPM: 10.9
Min nTPM: 7.3
Sample A Female 8.8
Sample B Female 7.3
Sample C Male 10.9
Sample D Male 9.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 12.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 10.9
Samples: 4

Max nTPM: 12.4
Min nTPM: 10.0
Sample A Male 11.0
Sample B Male 10.0
Sample C Female 12.4
Sample D Female 10.3
Hippocampal formation
nTPM: 12.3
Samples: 4

Max nTPM: 14.5
Min nTPM: 10.1
Sample A Male 10.1
Sample B Male 12.1
Sample C Female 12.4
Sample D Female 14.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.3
68498854 Antisense, RP_050113_02_E01, Mouse strain C57BL/6J (56 days, male) 0.3

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The Human Protein Atlas

The Human Protein Atlas project is funded
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