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AMYGDALA - Expression summary
Mouse brain, Intensity
Amygdalai 		132.615
RNA expressioni
Consensus:66.5 nTPM
HPA:66.5 nTPM
GTEx:67.0 nTPM
FANTOM5:195.9 Scaled Tags Per Million
Pig:63.4 nTPM
Mouse:289.3 nTPM
Allen mouse:26.4 Expression energy

AMYGDALA - Mouse brain profilei , antibody CAB034931
Amygdala mean intensity 132.615
intensityi
FRONT BACK
Nucleus of the lateral olfactory tract -
Basal medial amygdaloid nucleus 121.763
Basal lateral amygdala* -
Basal lateral amygdaloid nucleus 80.605
Cortical amygdala 120.174
Central amygdala 94.952
Medial amygdaloid nucleus 132.615

AMYGDALA - HPA Brain RNA-seq
Max nTPM 66.5
Sample id Sample description nTPM
Amygdala
nTPM: 20.0
1987 Female, age 91, left hemisphere 42.7
2517 Female, age 94, left hemisphere 28.1
2814 Male, age 76, right hemisphere 25.5
2514 Male, age 75, right hemisphere 3.7
2695 Female, age 67, right hemisphere 0.0
Basal amygdala
nTPM: 37.8
2243 Female, age 91, right hemisphere 75.3
2685 Female, age 94, left hemisphere 53.9
2110 Male, age 80, left hemisphere 37.6
1955 Male, age 76, both hemispheres 31.6
2827 Female, age 67, right hemisphere 19.2
2609 Male, age 75, right hemisphere 9.2
Central amygdala
nTPM: 28.2
2239 Male, age 80, left hemisphere 46.6
2826 Female, age 94, left hemisphere 30.8
2701 Female, age 91, right hemisphere 30.2
1905 Male, age 76, both hemispheres 25.2
2515 Male, age 75, right hemisphere 8.1
Corticomedial amygdala
nTPM: 43.9
2242 Female, age 91, right hemisphere 66.2
2829 Male, age 80, left hemisphere 62.4
2429 Female, age 94, left hemisphere 53.4
2535 Female, age 67, right hemisphere 40.5
2240 Male, age 76, both hemispheres 33.5
2428 Male, age 75, right hemisphere 7.0
Lateral amygdala
nTPM: 23.1
2255 Female, age 91, right hemisphere 46.5
2534 Female, age 94, left hemisphere 40.2
2256 Male, age 80, left hemisphere 26.9
1883 Male, age 76, both hemispheres 25.0
2830 Female, age 67, right hemisphere 0.1
2516 Male, age 75, right hemisphere 0.0
Stria terminalis, bed nucleus
nTPM: 66.5
2486 Female, age 94, both hemispheres 93.8
1974 Female, age 91, both hemispheres 80.1
2201 Male, age 74, unknown 25.6

AMYGDALA - GTEx RNA-seqi
Average nTPM 67.0
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 67.0
Samples: 152

Max nTPM: 166.8
Min nTPM: 0.9
Std nTPM: 35.2
Median nTPM: 62.2
GTEX-Q2AG-0011-R4A-SM-2HMKA 40-49 years, female 166.8
GTEX-1AX9I-0011-R4b-SM-7EPIB 60-69 years, male 162.5
GTEX-1JMQJ-0011-R4b-SM-EXUT8 50-59 years, male 157.1
GTEX-1HCU6-0011-R4b-SM-ARU74 60-69 years, female 142.1
GTEX-1IY9M-0011-R4a-SM-C1YQ2 60-69 years, male 139.4
GTEX-WZTO-0011-R4A-SM-3NMC7 40-49 years, male 139.3
GTEX-1H3NZ-0011-R4a-SM-CL54T 60-69 years, male 138.2
GTEX-14JIY-0011-R4b-SM-5ZZV7 60-69 years, male 131.4
GTEX-15SHU-0011-R4b-SM-7IGLC 40-49 years, female 131.4
GTEX-17EVP-0011-R4a-SM-79OML 40-49 years, male 129.6
GTEX-1HFI6-0011-R4b-SM-A96RT 40-49 years, male 125.5
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AMYGDALA - FANTOM5 CAGEi
Max Scaled Tags Per Million 195.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 195.9
FF:10151-102I7 76 years, female 195.9

AMYGDALA - Pig RNA-seqi
Average nTPM 63.4
Pig sample Sample description nTPM
Amygdala
nTPM: 63.4
Samples: 4

Max nTPM: 99.2
Min nTPM: 40.2
Sample A Female 99.2
Sample B Female 40.2
Sample C Male 51.2
Sample D Male 62.9

AMYGDALA - Mouse RNA-seqi
Average nTPM 289.3
Mouse sample Sample description nTPM
Amygdala
nTPM: 289.3
Samples: 4

Max nTPM: 295.3
Min nTPM: 286.0
Sample A Male 289.5
Sample B Male 295.3
Sample C Female 286.4
Sample D Female 286.0

AMYGDALA - Allen Mouse ISHi
Max Expression energy 26.4
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 26.4
634465 Antisense, RP_040914_01_B04, Mouse strain C57BL/6J (56 days, male) 27.6
70743867 Antisense, RP_050725_01_G07, Mouse strain C57BL/6J (56 days, male) 25.3

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.