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C4orf3
MIDBRAIN - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:104.9 nTPM
HPA:104.9 nTPM
GTEx:139.9 nTPM
FANTOM5:232.2 Scaled Tags Per Million
Pig:111.2 nTPM
Mouse:77.0 nTPM
Allen mouse:0.0 Expression energy

MIDBRAIN - HPA Brain RNA-seq
Max nTPM 104.9
Sample id Sample description nTPM
Cuneiform nucleus
nTPM: 99.8
2666 Male, age 74, left hemisphere 106.9
2586 Male, age 75, left hemisphere 105.6
1870 Female, age 42, unknown 105.0
2411 Female, age 72, unknown 102.8
1830 Male, age 51, unknown 102.3
2019 Male, age 18, unknown 100.4
1833 Male, age 53, unknown 100.2
1827 Male, age 72, unknown 96.2
2828 Female, age 72, unknown 93.6
2219 Male, age 76, both hemispheres 85.4
Dorsal raphe nucleus
nTPM: 96.3
2016 Female, age 72, unknown 98.6
2750 Male, age 76, both hemispheres 98.6
1828 Male, age 53, unknown 98.5
2047 Male, age 72, unknown 96.0
2298 Female, age 72, unknown 90.0
Inferior colliculus
nTPM: 97.8
1848 Female, age 42, unknown 101.1
2849 Male, age 72, unknown 99.4
1890 Male, age 53, unknown 95.4
2097 Female, age 72, unknown 95.3
Median raphe nucleus
nTPM: 98.4
2220 Male, age 76, midline 98.4
Pedunculopontine tegmental nucleus
nTPM: 99.8
2334 Male, age 80, both hemispheres 103.1
2338 Male, age 61, both hemispheres 102.7
1921 Female, age 85, both hemispheres 93.6
Periaquaductal grey, anterior
nTPM: 95.7
1947 Male, age 18, unknown 99.5
2502 Female, age 75, unknown 95.7
1795 Male, age 51, unknown 92.0
Periaquaductal grey, dorsal
nTPM: 94.3
2464 Female, age 72, unknown 97.4
2850 Male, age 76, both hemispheres 94.1
1840 Male, age 53, unknown 93.4
1831 Male, age 72, unknown 92.4
Periaquaductal grey, lateral
nTPM: 91.4
2053 Male, age 18, unknown 97.2
2140 Male, age 76, both hemispheres 89.6
2272 Male, age 74, both hemispheres 87.5
Pretectal area
nTPM: 94.0
2825 Male, age 18, unknown 98.7
1815 Male, age 53, unknown 97.2
1817 Female, age 42, unknown 97.2
1816 Male, age 51, unknown 96.4
2007 Male, age 72, unknown 96.0
2407 Male, age 75, both hemispheres 95.9
1944 Female, age 72, unknown 93.8
2316 Male, age 76, right hemisphere 91.7
2224 Female, age 72, unknown 91.4
2667 Female, age 75, unknown 88.9
2273 Male, age 74, both hemispheres 87.1
Red nucleus
nTPM: 104.9
2588 Male, age 74, left hemisphere 112.6
1954 Female, age 42, unknown 111.8
1821 Female, age 72, unknown 111.6
2503 Female, age 72, unknown 108.8
1865 Male, age 51, unknown 107.3
2227 Male, age 72, unknown 106.0
1904 Male, age 53, unknown 105.7
2769 Male, age 72, unknown 103.3
2823 Male, age 76, right hemisphere 101.4
2584 Male, age 75, left hemisphere 98.0
2725 Female, age 75, unknown 96.7
2785 Male, age 18, unknown 95.9
Substantia nigra
nTPM: 96.4
2665 Male, age 74, both hemispheres 103.7
2590 Female, age 75, unknown 102.7
2583 Male, age 75, right hemisphere 99.2
1889 Female, age 72, unknown 98.7
2241 Male, age 72, unknown 98.7
1941 Male, age 53, unknown 95.7
2409 Female, age 72, unknown 93.2
1851 Male, age 51, unknown 93.0
2699 Male, age 18, unknown 91.6
1916 Female, age 42, unknown 87.4
Superior colliculus
nTPM: 97.7
2668 Female, age 75, unknown 104.8
2587 Male, age 74, left hemisphere 104.5
2664 Male, age 75, both hemispheres 101.9
1839 Male, age 51, unknown 100.0
1913 Female, age 42, unknown 98.6
1995 Male, age 72, unknown 96.1
2261 Male, age 18, unknown 94.1
1895 Male, age 76, right hemisphere 93.7
2087 Female, age 72, unknown 93.7
1796 Male, age 53, unknown 89.8
Ventral tegmental area
nTPM: 96.5
2223 Female, age 72, unknown 103.7
2021 Male, age 53, unknown 101.0
1915 Female, age 42, unknown 95.8
2410 Female, age 72, unknown 94.9
1942 Male, age 51, unknown 93.4
2218 Male, age 76, both hemispheres 90.2

MIDBRAIN - GTEx RNA-seqi
Average nTPM 139.9
GTEx sample id Sample description nTPM
Brain - Substantia nigra
Average nTPM: 139.9
Samples: 139

Max nTPM: 320.4
Min nTPM: 62.9
Std nTPM: 53.4
Median nTPM: 128.2
GTEX-ZV68-0011-R2a-SM-4YCDK 50-59 years, female 320.4
GTEX-1LVA9-0011-R2a-SM-EZ6MJ 50-59 years, male 309.0
GTEX-1LB8K-0011-R2a-SM-EZ6MQ 50-59 years, male 289.6
GTEX-1IKOH-0011-R2a-SM-CMKHO 60-69 years, female 265.0
GTEX-YJ89-0011-R2b-SM-4RGLT 60-69 years, male 259.9
GTEX-1IGQW-0011-R2b-SM-D4P26 60-69 years, male 258.6
GTEX-1GN1U-0011-R2a-SM-CL53A 50-59 years, female 257.9
GTEX-139TS-0011-R2b-SM-5J1MX 60-69 years, male 251.2
GTEX-ZDXO-0011-R2b-SM-4WKFG 60-69 years, male 247.0
GTEX-1A8G7-0011-R2a-SM-7IGQI 60-69 years, male 240.7
GTEX-OXRO-0011-R2A-SM-3NB1W 60-69 years, female 228.6
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MIDBRAIN - FANTOM5 CAGEi
Max Scaled Tags Per Million 232.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Substantia nigra
Scaled Tags Per Million: 232.2
FF:10158-103A5 76 years, female 232.2

MIDBRAIN - Pig RNA-seqi
Average nTPM 111.2
Pig sample Sample description nTPM
Midbrain
nTPM: 107.2
Samples: 4

Max nTPM: 116.8
Min nTPM: 102.8
Sample A Female 102.8
Sample B Female 104.4
Sample C Male 116.8
Sample D Male 104.7
Periaqueductal gray
nTPM: 86.4
Samples: 3

Max nTPM: 91.4
Min nTPM: 76.9
Sample B Female 90.8
Sample C Male 91.4
Sample D Male 76.9
Substantia nigra
nTPM: 95.9
Samples: 4

Max nTPM: 121.7
Min nTPM: 71.1
Sample A Female 121.7
Sample B Female 97.2
Sample C Male 93.7
Sample D Male 71.1
Superior colliculi
nTPM: 111.2
Samples: 4

Max nTPM: 123.7
Min nTPM: 99.1
Sample A Female 123.7
Sample B Female 102.7
Sample C Male 119.2
Sample D Male 99.1

MIDBRAIN - Mouse RNA-seqi
Average nTPM 77.0
Mouse sample Sample description nTPM
Midbrain
nTPM: 77.0
Samples: 4

Max nTPM: 89.4
Min nTPM: 67.6
Sample A Male 89.4
Sample B Male 73.2
Sample C Female 67.6
Sample D Female 77.8

MIDBRAIN - Allen Mouse ISHi
Max Expression energy 0.0
Allen experiment id Experiment description Expression energy
Midbrain
Expression energy: 0.0
67978735 Antisense, RP_040923_01_G04, Mouse strain C57BL/6J (56 days, male) 0.0

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The Human Protein Atlas project is funded
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