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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
RNA expressioni
Consensus:84.3 nTPM
HPA:84.3 nTPM
GTEx:74.8 nTPM
FANTOM5:89.7 Scaled Tags Per Million
Pig:17.9 nTPM
Mouse:77.7 nTPM
Allen mouse:1.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA037679Antibody HPA037680
Glial cells LowLow
Neuronal cells LowMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 84.3
Sample id Sample description nTPM
Hippocampus
nTPM: 80.4
1898 Male, age 80, left hemisphere 88.6
1855 Male, age 76, left hemisphere 81.4
2529 Female, age 94, left hemisphere 79.9
2621 Female, age 67, right hemisphere 79.1
1911 Female, age 85, right hemisphere 77.5
2148 Female, age 91, left hemisphere 76.3
Dentate gyrus
nTPM: 79.8
1927 Female, age 91, both hemispheres 86.1
2010 Male, age 76, both hemispheres 85.2
2528 Male, age 74, both hemispheres 80.5
2246 Female, age 85, both hemispheres 78.5
2530 Female, age 94, left hemisphere 76.4
2531 Female, age 67, both hemispheres 72.0
Entorhinal gyrus
nTPM: 77.7
1938 Female, age 85, left hemisphere 88.2
1787 Male, age 76, left hemisphere 78.5
2764 Male, age 80, right hemisphere 78.2
2686 Male, age 75, right hemisphere 74.7
2117 Female, age 91, right hemisphere 73.7
2613 Female, age 94, left hemisphere 72.7
Hippocampus, CA1
nTPM: 84.3
2749 Male, age 80, left hemisphere 100.9
1873 Female, age 85, both hemispheres 87.1
2045 Male, age 76, both hemispheres 80.0
2527 Male, age 74, both hemispheres 79.7
2082 Female, age 91, right hemisphere 74.0
Hippocampus, CA2
nTPM: 81.4
1892 Male, age 76, both hemispheres 91.5
1963 Male, age 80, left hemisphere 89.1
2249 Male, age 74, both hemispheres 81.5
1940 Female, age 85, left hemisphere 76.8
2113 Female, age 91, right hemisphere 74.9
2437 Female, age 94, left hemisphere 74.7
Hippocampus, CA3
nTPM: 80.5
2137 Male, age 80, left hemisphere 89.9
1867 Male, age 76, both hemispheres 84.2
1891 Female, age 85, both hemispheres 80.6
2620 Female, age 94, left hemisphere 79.2
2436 Male, age 74, both hemispheres 78.3
2861 Female, age 67, both hemispheres 70.6
Parahippocampal cortex
nTPM: 78.5
1850 Male, age 80, both hemispheres 89.2
1933 Female, age 85, both hemispheres 83.3
2250 Female, age 67, right hemisphere 80.2
2018 Male, age 76, both hemispheres 78.6
1990 Female, age 91, right hemisphere 78.1
2245 Female, age 91, both hemispheres 77.7
2693 Female, age 94, both hemispheres 77.0
2532 Female, age 72, left hemisphere 74.5
2622 Female, age 67, right hemisphere 73.5
2692 Male, age 74, both hemispheres 73.4
Perirhinal gyrus
nTPM: 84.2
1847 Female, age 91, left hemisphere 90.4
1841 Female, age 85, right hemisphere 86.3
1794 Male, age 80, right hemisphere 85.4
2848 Male, age 76, right hemisphere 79.9
2521 Female, age 94, right hemisphere 79.2
Subiculum
nTPM: 78.2
1901 Male, age 80, both hemispheres 81.4
1977 Female, age 85, both hemispheres 80.6
2042 Male, age 76, both hemispheres 78.6
2619 Male, age 74, both hemispheres 76.7
2729 Female, age 91, right hemisphere 76.4
2438 Female, age 94, left hemisphere 75.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 74.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 74.8
Samples: 197

Max nTPM: 194.1
Min nTPM: 18.8
Std nTPM: 25.0
Median nTPM: 74.5
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 194.1
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 154.9
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 153.2
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 140.0
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 125.7
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 124.2
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 123.4
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 122.5
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 117.6
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 116.6
GTEX-1A3MX-0011-R1b-SM-7P8PH 60-69 years, male 112.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 89.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 89.7
FF:10169-103B7 60 years, female 103.5
FF:10153-102I9 76 years, female 75.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 17.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 15.7
Samples: 4

Max nTPM: 19.0
Min nTPM: 13.9
Sample A Female 13.9
Sample B Female 14.1
Sample C Male 15.7
Sample D Male 19.0
Entorhinal cortex
nTPM: 17.9
Samples: 4

Max nTPM: 20.2
Min nTPM: 13.7
Sample A Female 13.7
Sample B Female 20.2
Sample C Male 19.0
Sample D Male 18.8
Subiculum
nTPM: 15.7
Samples: 4

Max nTPM: 16.5
Min nTPM: 15.3
Sample A Female 16.5
Sample B Female 15.3
Sample C Male 15.4
Sample D Male 15.5
Ventral hippocampus
nTPM: 14.5
Samples: 4

Max nTPM: 17.4
Min nTPM: 11.9
Sample A Female 14.7
Sample B Female 17.4
Sample C Male 11.9
Sample D Male 13.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 77.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 64.4
Samples: 4

Max nTPM: 69.3
Min nTPM: 59.7
Sample A Male 59.7
Sample B Male 66.4
Sample C Female 69.3
Sample D Female 62.1
Hippocampal formation
nTPM: 77.7
Samples: 4

Max nTPM: 85.8
Min nTPM: 70.0
Sample A Male 85.8
Sample B Male 80.3
Sample C Female 70.0
Sample D Female 74.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.4
74990524 Antisense, RP_060410_01_C07, Mouse strain C57BL/6J (56 days, male) 1.4

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The Human Protein Atlas

The Human Protein Atlas project is funded
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