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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: High
RNA expressioni
Consensus:68.1 nTPM
HPA:68.1 nTPM
GTEx:90.7 nTPM
FANTOM5:253.6 Scaled Tags Per Million
Pig:57.2 nTPM
Mouse:66.7 nTPM
Allen mouse:0.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA020415
Glial cells High
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 68.1
Sample id Sample description nTPM
Hippocampus
nTPM: 57.8
1855 Male, age 76, left hemisphere 70.4
1911 Female, age 85, right hemisphere 68.0
1898 Male, age 80, left hemisphere 60.2
2621 Female, age 67, right hemisphere 54.4
2148 Female, age 91, left hemisphere 47.6
2529 Female, age 94, left hemisphere 46.2
Dentate gyrus
nTPM: 65.1
2010 Male, age 76, both hemispheres 76.5
2530 Female, age 94, left hemisphere 76.0
1927 Female, age 91, both hemispheres 63.6
2531 Female, age 67, both hemispheres 60.9
2246 Female, age 85, both hemispheres 59.7
2528 Male, age 74, both hemispheres 53.8
Entorhinal gyrus
nTPM: 43.4
2117 Female, age 91, right hemisphere 72.7
2764 Male, age 80, right hemisphere 46.7
1938 Female, age 85, left hemisphere 43.1
2613 Female, age 94, left hemisphere 34.4
1787 Male, age 76, left hemisphere 34.0
2686 Male, age 75, right hemisphere 29.5
Hippocampus, CA1
nTPM: 68.1
2045 Male, age 76, both hemispheres 107.1
1873 Female, age 85, both hemispheres 82.7
2749 Male, age 80, left hemisphere 64.9
2527 Male, age 74, both hemispheres 45.8
2082 Female, age 91, right hemisphere 39.8
Hippocampus, CA2
nTPM: 59.2
1963 Male, age 80, left hemisphere 77.2
1892 Male, age 76, both hemispheres 73.7
2249 Male, age 74, both hemispheres 65.2
1940 Female, age 85, left hemisphere 50.2
2437 Female, age 94, left hemisphere 47.2
2113 Female, age 91, right hemisphere 42.0
Hippocampus, CA3
nTPM: 55.5
1891 Female, age 85, both hemispheres 85.7
2620 Female, age 94, left hemisphere 75.6
1867 Male, age 76, both hemispheres 65.3
2137 Male, age 80, left hemisphere 41.8
2436 Male, age 74, both hemispheres 35.8
2861 Female, age 67, both hemispheres 28.7
Parahippocampal cortex
nTPM: 40.1
1990 Female, age 91, right hemisphere 51.6
2532 Female, age 72, left hemisphere 49.0
2018 Male, age 76, both hemispheres 48.0
2692 Male, age 74, both hemispheres 43.7
1933 Female, age 85, both hemispheres 43.4
1850 Male, age 80, both hemispheres 42.1
2245 Female, age 91, both hemispheres 39.6
2693 Female, age 94, both hemispheres 37.7
2250 Female, age 67, right hemisphere 30.7
2622 Female, age 67, right hemisphere 15.6
Perirhinal gyrus
nTPM: 36.8
2521 Female, age 94, right hemisphere 41.1
1794 Male, age 80, right hemisphere 38.3
1841 Female, age 85, right hemisphere 38.2
2848 Male, age 76, right hemisphere 36.1
1847 Female, age 91, left hemisphere 30.4
Subiculum
nTPM: 61.2
2042 Male, age 76, both hemispheres 82.8
1901 Male, age 80, both hemispheres 74.6
1977 Female, age 85, both hemispheres 64.4
2438 Female, age 94, left hemisphere 55.5
2729 Female, age 91, right hemisphere 48.0
2619 Male, age 74, both hemispheres 41.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 90.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 90.7
Samples: 197

Max nTPM: 280.7
Min nTPM: 9.4
Std nTPM: 45.8
Median nTPM: 85.7
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 280.7
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 280.6
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 238.4
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 215.7
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 209.9
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 204.4
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 204.3
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 194.5
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 184.2
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 181.3
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 174.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 253.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 253.6
FF:10169-103B7 60 years, female 255.3
FF:10153-102I9 76 years, female 252.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 57.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 57.3
Samples: 4

Max nTPM: 74.0
Min nTPM: 36.8
Sample A Female 74.0
Sample B Female 51.3
Sample C Male 66.9
Sample D Male 36.8
Entorhinal cortex
nTPM: 40.7
Samples: 4

Max nTPM: 42.3
Min nTPM: 39.2
Sample A Female 41.9
Sample B Female 42.3
Sample C Male 39.2
Sample D Male 39.4
Subiculum
nTPM: 36.9
Samples: 4

Max nTPM: 40.2
Min nTPM: 34.4
Sample A Female 40.2
Sample B Female 36.9
Sample C Male 35.9
Sample D Male 34.4
Ventral hippocampus
nTPM: 50.6
Samples: 4

Max nTPM: 57.4
Min nTPM: 37.3
Sample A Female 57.4
Sample B Female 37.3
Sample C Male 53.4
Sample D Male 54.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 66.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 66.7
Samples: 4

Max nTPM: 73.1
Min nTPM: 55.1
Sample A Male 73.1
Sample B Male 72.2
Sample C Female 55.1
Sample D Female 66.5
Hippocampal formation
nTPM: 51.5
Samples: 4

Max nTPM: 57.7
Min nTPM: 46.7
Sample A Male 48.5
Sample B Male 52.9
Sample C Female 57.7
Sample D Female 46.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.3
76003522 Antisense, RP_060608_02_F03, Mouse strain C57BL/6J (56 days, male) 0.3

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The Human Protein Atlas

The Human Protein Atlas project is funded
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