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RHOBTB3
HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:55.6 nTPM
HPA:55.6 nTPM
GTEx:34.6 nTPM
FANTOM5:128.0 Scaled Tags Per Million
Pig:11.6 nTPM
Mouse:14.4 nTPM
Allen mouse:0.7 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 55.6
Sample id Sample description nTPM
Hippocampus
nTPM: 54.8
2529 Female, age 94, left hemisphere 62.3
1911 Female, age 85, right hemisphere 60.5
2148 Female, age 91, left hemisphere 58.7
1855 Male, age 76, left hemisphere 53.9
1898 Male, age 80, left hemisphere 53.8
2621 Female, age 67, right hemisphere 39.7
Dentate gyrus
nTPM: 49.5
2528 Male, age 74, both hemispheres 68.8
2010 Male, age 76, both hemispheres 55.2
2246 Female, age 85, both hemispheres 48.8
2530 Female, age 94, left hemisphere 44.4
1927 Female, age 91, both hemispheres 41.8
2531 Female, age 67, both hemispheres 37.9
Entorhinal gyrus
nTPM: 48.1
2117 Female, age 91, right hemisphere 65.3
1938 Female, age 85, left hemisphere 53.4
1787 Male, age 76, left hemisphere 49.5
2686 Male, age 75, right hemisphere 46.5
2764 Male, age 80, right hemisphere 41.0
2613 Female, age 94, left hemisphere 32.7
Hippocampus, CA1
nTPM: 50.5
2527 Male, age 74, both hemispheres 66.6
1873 Female, age 85, both hemispheres 58.9
2082 Female, age 91, right hemisphere 49.3
2045 Male, age 76, both hemispheres 47.6
2749 Male, age 80, left hemisphere 30.2
Hippocampus, CA2
nTPM: 44.2
2113 Female, age 91, right hemisphere 50.9
2249 Male, age 74, both hemispheres 50.7
1963 Male, age 80, left hemisphere 48.9
1940 Female, age 85, left hemisphere 42.2
2437 Female, age 94, left hemisphere 39.2
1892 Male, age 76, both hemispheres 33.5
Hippocampus, CA3
nTPM: 44.9
1891 Female, age 85, both hemispheres 63.5
2861 Female, age 67, both hemispheres 51.0
2620 Female, age 94, left hemisphere 48.7
2436 Male, age 74, both hemispheres 39.7
1867 Male, age 76, both hemispheres 36.0
2137 Male, age 80, left hemisphere 30.7
Parahippocampal cortex
nTPM: 47.9
2692 Male, age 74, both hemispheres 68.8
1933 Female, age 85, both hemispheres 52.3
2018 Male, age 76, both hemispheres 51.0
2622 Female, age 67, right hemisphere 49.7
1990 Female, age 91, right hemisphere 49.6
2250 Female, age 67, right hemisphere 46.5
1850 Male, age 80, both hemispheres 44.7
2245 Female, age 91, both hemispheres 39.8
2532 Female, age 72, left hemisphere 38.4
2693 Female, age 94, both hemispheres 38.2
Perirhinal gyrus
nTPM: 39.9
1847 Female, age 91, left hemisphere 45.1
1794 Male, age 80, right hemisphere 41.9
1841 Female, age 85, right hemisphere 39.9
2521 Female, age 94, right hemisphere 37.9
2848 Male, age 76, right hemisphere 34.5
Subiculum
nTPM: 55.6
2619 Male, age 74, both hemispheres 75.0
2729 Female, age 91, right hemisphere 69.3
1977 Female, age 85, both hemispheres 50.7
1901 Male, age 80, both hemispheres 48.7
2042 Male, age 76, both hemispheres 46.2
2438 Female, age 94, left hemisphere 43.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 34.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 34.6
Samples: 197

Max nTPM: 93.2
Min nTPM: 9.5
Std nTPM: 13.7
Median nTPM: 32.8
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 93.2
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 85.9
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 79.9
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 70.1
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 69.2
GTEX-11ZVC-0011-R1b-SM-5BC6M 50-59 years, female 67.9
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 67.3
GTEX-QDT8-0011-R1A-SM-32PKS 30-39 years, female 64.6
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 63.8
GTEX-1A3MX-0011-R1b-SM-7P8PH 60-69 years, male 63.4
GTEX-14PQA-0011-R1b-SM-6EU1G 50-59 years, female 60.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 128.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 128.0
FF:10153-102I9 76 years, female 157.8
FF:10169-103B7 60 years, female 98.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 11.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 11.6
Samples: 4

Max nTPM: 12.8
Min nTPM: 10.9
Sample A Female 12.8
Sample B Female 10.9
Sample C Male 11.7
Sample D Male 11.1
Entorhinal cortex
nTPM: 9.7
Samples: 4

Max nTPM: 11.5
Min nTPM: 8.2
Sample A Female 8.2
Sample B Female 11.5
Sample C Male 10.0
Sample D Male 8.9
Subiculum
nTPM: 9.4
Samples: 4

Max nTPM: 10.3
Min nTPM: 8.9
Sample A Female 9.5
Sample B Female 10.3
Sample C Male 9.0
Sample D Male 8.9
Ventral hippocampus
nTPM: 10.0
Samples: 4

Max nTPM: 10.9
Min nTPM: 9.5
Sample A Female 9.8
Sample B Female 9.8
Sample C Male 9.5
Sample D Male 10.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 14.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 11.1
Samples: 4

Max nTPM: 12.3
Min nTPM: 9.4
Sample A Male 12.3
Sample B Male 11.0
Sample C Female 11.7
Sample D Female 9.4
Hippocampal formation
nTPM: 14.4
Samples: 4

Max nTPM: 15.7
Min nTPM: 13.3
Sample A Male 14.3
Sample B Male 13.3
Sample C Female 15.7
Sample D Female 14.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.7
68797727 Antisense, RP_050215_01_A06, Mouse strain C57BL/6J (56 days, male) 1.2
74583162 Antisense, RP_051214_02_F10, Mouse strain C57BL/6J (56 days, male) 0.2

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The Human Protein Atlas

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