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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:283.6 nTPM
HPA:283.6 nTPM
GTEx:325.3 nTPM
FANTOM5:142.3 Scaled Tags Per Million
Pig:113.1 nTPM
Mouse:237.1 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA046693
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 283.6
Sample id Sample description nTPM
Hippocampus
nTPM: 275.5
1898 Male, age 80, left hemisphere 306.0
2529 Female, age 94, left hemisphere 272.4
2621 Female, age 67, right hemisphere 271.4
1855 Male, age 76, left hemisphere 270.8
1911 Female, age 85, right hemisphere 270.2
2148 Female, age 91, left hemisphere 262.2
Dentate gyrus
nTPM: 271.0
2010 Male, age 76, both hemispheres 287.5
1927 Female, age 91, both hemispheres 282.9
2530 Female, age 94, left hemisphere 273.5
2528 Male, age 74, both hemispheres 265.3
2246 Female, age 85, both hemispheres 261.8
2531 Female, age 67, both hemispheres 255.0
Entorhinal gyrus
nTPM: 269.4
2764 Male, age 80, right hemisphere 280.6
1938 Female, age 85, left hemisphere 278.2
1787 Male, age 76, left hemisphere 275.1
2117 Female, age 91, right hemisphere 266.5
2686 Male, age 75, right hemisphere 260.9
2613 Female, age 94, left hemisphere 255.6
Hippocampus, CA1
nTPM: 283.6
2749 Male, age 80, left hemisphere 310.1
2527 Male, age 74, both hemispheres 281.3
1873 Female, age 85, both hemispheres 280.5
2045 Male, age 76, both hemispheres 278.2
2082 Female, age 91, right hemisphere 268.0
Hippocampus, CA2
nTPM: 282.0
1892 Male, age 76, both hemispheres 301.3
1963 Male, age 80, left hemisphere 295.4
2249 Male, age 74, both hemispheres 289.9
2437 Female, age 94, left hemisphere 271.7
1940 Female, age 85, left hemisphere 268.8
2113 Female, age 91, right hemisphere 264.7
Hippocampus, CA3
nTPM: 275.2
1867 Male, age 76, both hemispheres 289.3
2436 Male, age 74, both hemispheres 289.0
1891 Female, age 85, both hemispheres 276.9
2137 Male, age 80, left hemisphere 276.7
2620 Female, age 94, left hemisphere 260.1
2861 Female, age 67, both hemispheres 259.2
Parahippocampal cortex
nTPM: 271.1
1850 Male, age 80, both hemispheres 287.3
2018 Male, age 76, both hemispheres 283.4
2250 Female, age 67, right hemisphere 279.6
1933 Female, age 85, both hemispheres 279.4
1990 Female, age 91, right hemisphere 273.2
2245 Female, age 91, both hemispheres 267.0
2693 Female, age 94, both hemispheres 266.6
2532 Female, age 72, left hemisphere 259.9
2692 Male, age 74, both hemispheres 258.4
2622 Female, age 67, right hemisphere 256.6
Perirhinal gyrus
nTPM: 283.1
1847 Female, age 91, left hemisphere 301.9
1794 Male, age 80, right hemisphere 291.3
1841 Female, age 85, right hemisphere 287.0
2521 Female, age 94, right hemisphere 269.1
2848 Male, age 76, right hemisphere 266.3
Subiculum
nTPM: 271.6
1901 Male, age 80, both hemispheres 281.8
1977 Female, age 85, both hemispheres 279.6
2042 Male, age 76, both hemispheres 275.3
2619 Male, age 74, both hemispheres 275.2
2729 Female, age 91, right hemisphere 261.3
2438 Female, age 94, left hemisphere 256.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 325.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 325.3
Samples: 197

Max nTPM: 1104.9
Min nTPM: 143.4
Std nTPM: 118.7
Median nTPM: 309.2
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 1104.9
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 728.3
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 727.2
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 669.5
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 641.5
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 604.9
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 598.2
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 593.5
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 577.8
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 575.5
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 572.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 142.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 142.3
FF:10169-103B7 60 years, female 185.2
FF:10153-102I9 76 years, female 99.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 113.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 113.1
Samples: 4

Max nTPM: 161.8
Min nTPM: 81.3
Sample A Female 161.8
Sample B Female 112.3
Sample C Male 97.1
Sample D Male 81.3
Entorhinal cortex
nTPM: 103.8
Samples: 4

Max nTPM: 132.0
Min nTPM: 74.0
Sample A Female 103.3
Sample B Female 132.0
Sample C Male 106.0
Sample D Male 74.0
Subiculum
nTPM: 86.2
Samples: 4

Max nTPM: 123.7
Min nTPM: 69.9
Sample A Female 123.7
Sample B Female 78.6
Sample C Male 69.9
Sample D Male 72.6
Ventral hippocampus
nTPM: 106.7
Samples: 4

Max nTPM: 136.0
Min nTPM: 79.6
Sample A Female 136.0
Sample B Female 79.6
Sample C Male 117.8
Sample D Male 93.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 237.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 237.1
Samples: 4

Max nTPM: 267.5
Min nTPM: 222.4
Sample A Male 228.6
Sample B Male 267.5
Sample C Female 229.8
Sample D Female 222.4
Hippocampal formation
nTPM: 223.2
Samples: 4

Max nTPM: 262.0
Min nTPM: 185.1
Sample A Male 228.7
Sample B Male 216.9
Sample C Female 185.1
Sample D Female 262.0

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.