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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
For selected proteins extended tissue profiling is performed in addition to standard tissue microarrays. The section below contains results from the extended profiling.
, antibody HPA019195
Pigment epithelial cells
Not detected
Photoreceptor cells
High
Limiting membrane
Not detected
Outer plexiform layer
High
Inner nuclear layer
Low
Inner plexiform layer
High
Ganglion cells
Not detected
Nerve fiber layer
High
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM: 37.7
Min nTPM: 7.0
Std nTPM: 5.5
Median nTPM:
415_1
77 years, female
37.7
490_1
67 years, female
36.6
466_1
57 years, female
31.7
413_1
59 years, female
30.4
468_1
89 years, male
30.0
81_1
67 years, male
28.0
32_1
67 years, male
27.4
518_1
75 years, female
27.2
217_1
76 years, male
25.4
149_1
88 years, male
25.3
142_1
61 years, female
23.7
491_1
89 years, female
23.6
316_1
62 years, male
22.5
414_1
84 years, female
22.3
126_1
63 years, male
21.7
389_1
86 years, female
21.7
526_1
61 years, male
21.5
6_1
73 years, female
21.3
139_1
64 years, female
21.2
499_1
55 years, female
21.2
335_1
73 years, female
21.0
375_1
74 years, female
21.0
162_1
79 years, female
20.8
495_1
57 years, female
20.8
43_1
64 years, female
20.7
172_1
72 years, female
20.1
237_1
82 years, male
20.0
153_1
70 years, female
19.7
503_1
68 years, male
19.7
396_1
62 years, male
19.5
354_1
81 years, female
19.4
480_1
63 years, male
19.4
35_1
74 years, female
19.2
246_1
77 years, male
19.2
265_1
87 years, male
19.2
352_1
62 years, male
19.0
229_1
69 years, female
18.8
321_1
62 years, female
18.7
425_1
59 years, female
18.7
9_1
66 years, female
18.6
324_1
76 years, male
18.6
348_1
84 years, male
18.6
291_1
76 years, male
18.2
2_1
77 years, female
18.1
115_1
83 years, male
17.9
447_1
81 years, male
17.9
376_1
75 years, female
17.8
406_1
79 years, male
17.6
501_1
88 years, male
17.3
145_1
84 years, male
17.2
405_1
91 years, male
17.1
311_1
78 years, male
16.9
313_1
79 years, female
16.9
292_1
71 years, male
16.8
314_1
67 years, male
16.8
18_1
88 years, male
16.7
266_1
85 years, male
16.7
254_1
77 years, female
16.6
251_1
78 years, male
16.4
286_1
68 years, female
16.4
350_1
84 years, female
16.2
517_1
88 years, male
16.2
117_1
61 years, male
16.1
42_1
85 years, male
16.0
319_1
81 years, male
15.9
4_1
88 years, female
15.8
99_1
64 years, male
15.7
288_1
66 years, female
15.7
243_1
75 years, male
15.6
315_1
62 years, female
15.5
307_1
66 years, female
15.4
320_1
89 years, female
15.1
355_1
70 years, female
15.1
89_1
63 years, male
15.0
109_1
81 years, female
15.0
394_1
75 years, female
14.7
318_1
68 years, male
14.5
377_1
82 years, female
14.5
349_1
83 years, male
14.2
347_1
72 years, male
13.8
163_1
78 years, male
13.5
322_1
76 years, male
13.5
17_1
71 years, male
13.4
404_1
82 years, female
13.4
218_1
71 years, female
13.1
386_1
76 years, male
13.0
137_1
83 years, male
12.8
264_1
73 years, female
12.7
120_1
70 years, female
12.6
353_1
82 years, female
12.2
356_1
87 years, female
12.0
384_1
83 years, male
12.0
293_1
68 years, female
11.6
351_1
91 years, male
11.4
189_1
76 years, male
11.2
379_1
60 years, male
11.0
119_1
70 years, female
10.6
295_1
61 years, female
10.0
308_1
70 years, female
9.9
506_1
65 years, male
9.5
173_1
67 years, male
9.4
177_1
74 years, male
9.2
317_1
60 years, male
8.6
452_1
88 years, female
7.5
41_1
94 years, female
7.0
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
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