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BRI3
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:36.4 nTPM
HPA:36.4 nTPM
GTEx:50.3 nTPM
FANTOM5:57.8 Scaled Tags Per Million
Pig:35.5 nTPM
Mouse:73.2 nTPM
Allen mouse:0.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA042215
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 36.4
Sample id Sample description nTPM
Hippocampus
nTPM: 36.4
2621 Female, age 67, right hemisphere 38.4
1898 Male, age 80, left hemisphere 37.6
1855 Male, age 76, left hemisphere 37.2
2148 Female, age 91, left hemisphere 36.6
2529 Female, age 94, left hemisphere 36.0
1911 Female, age 85, right hemisphere 32.7
Dentate gyrus
nTPM: 34.5
2530 Female, age 94, left hemisphere 39.3
2010 Male, age 76, both hemispheres 39.2
2528 Male, age 74, both hemispheres 33.7
1927 Female, age 91, both hemispheres 33.2
2531 Female, age 67, both hemispheres 31.7
2246 Female, age 85, both hemispheres 29.8
Entorhinal gyrus
nTPM: 34.3
2764 Male, age 80, right hemisphere 37.3
2117 Female, age 91, right hemisphere 36.7
1938 Female, age 85, left hemisphere 35.0
1787 Male, age 76, left hemisphere 33.7
2613 Female, age 94, left hemisphere 33.7
2686 Male, age 75, right hemisphere 29.1
Hippocampus, CA1
nTPM: 31.2
2749 Male, age 80, left hemisphere 34.3
2045 Male, age 76, both hemispheres 34.0
1873 Female, age 85, both hemispheres 33.5
2527 Male, age 74, both hemispheres 33.3
2082 Female, age 91, right hemisphere 20.8
Hippocampus, CA2
nTPM: 34.3
1940 Female, age 85, left hemisphere 39.0
2249 Male, age 74, both hemispheres 36.7
1963 Male, age 80, left hemisphere 36.2
2437 Female, age 94, left hemisphere 34.8
1892 Male, age 76, both hemispheres 33.0
2113 Female, age 91, right hemisphere 25.9
Hippocampus, CA3
nTPM: 34.1
1867 Male, age 76, both hemispheres 39.0
2861 Female, age 67, both hemispheres 38.4
2620 Female, age 94, left hemisphere 34.8
2436 Male, age 74, both hemispheres 34.3
1891 Female, age 85, both hemispheres 32.1
2137 Male, age 80, left hemisphere 25.8
Parahippocampal cortex
nTPM: 32.5
2018 Male, age 76, both hemispheres 41.1
2250 Female, age 67, right hemisphere 33.7
1990 Female, age 91, right hemisphere 33.2
2622 Female, age 67, right hemisphere 32.9
2245 Female, age 91, both hemispheres 32.7
1933 Female, age 85, both hemispheres 32.0
2692 Male, age 74, both hemispheres 31.0
2693 Female, age 94, both hemispheres 29.7
2532 Female, age 72, left hemisphere 29.3
1850 Male, age 80, both hemispheres 29.1
Perirhinal gyrus
nTPM: 29.7
2521 Female, age 94, right hemisphere 32.5
1794 Male, age 80, right hemisphere 31.0
1847 Female, age 91, left hemisphere 30.1
2848 Male, age 76, right hemisphere 27.9
1841 Female, age 85, right hemisphere 27.0
Subiculum
nTPM: 36.3
2729 Female, age 91, right hemisphere 40.5
2619 Male, age 74, both hemispheres 39.6
1901 Male, age 80, both hemispheres 36.3
1977 Female, age 85, both hemispheres 36.0
2042 Male, age 76, both hemispheres 36.0
2438 Female, age 94, left hemisphere 29.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 50.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 50.3
Samples: 197

Max nTPM: 113.2
Min nTPM: 25.7
Std nTPM: 12.9
Median nTPM: 49.1
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 113.2
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 103.4
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 88.2
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 83.6
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 79.6
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 79.6
GTEX-1B933-0011-R1b-SM-9QEGW 50-59 years, female 78.6
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 73.1
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 73.0
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 72.6
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 70.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 57.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 57.8
FF:10153-102I9 76 years, female 70.7
FF:10169-103B7 60 years, female 44.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 35.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 35.5
Samples: 4

Max nTPM: 46.9
Min nTPM: 25.8
Sample A Female 46.9
Sample B Female 33.3
Sample C Male 35.9
Sample D Male 25.8
Entorhinal cortex
nTPM: 32.3
Samples: 4

Max nTPM: 39.5
Min nTPM: 24.3
Sample A Female 31.3
Sample B Female 34.1
Sample C Male 39.5
Sample D Male 24.3
Subiculum
nTPM: 34.1
Samples: 4

Max nTPM: 45.5
Min nTPM: 27.2
Sample A Female 45.5
Sample B Female 31.2
Sample C Male 27.2
Sample D Male 32.3
Ventral hippocampus
nTPM: 32.3
Samples: 4

Max nTPM: 38.5
Min nTPM: 27.2
Sample A Female 30.5
Sample B Female 27.2
Sample C Male 38.5
Sample D Male 33.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 73.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 72.1
Samples: 4

Max nTPM: 76.2
Min nTPM: 63.4
Sample A Male 72.8
Sample B Male 76.0
Sample C Female 76.2
Sample D Female 63.4
Hippocampal formation
nTPM: 73.2
Samples: 4

Max nTPM: 78.1
Min nTPM: 65.9
Sample A Male 78.1
Sample B Male 65.9
Sample C Female 77.8
Sample D Female 71.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.7
70528396 Antisense, RP_050623_02_E04, Mouse strain C57BL/6J (56 days, male) 0.7

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