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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: Medium
RNA expressioni
Consensus:58.1 nTPM
HPA:58.1 nTPM
GTEx:64.9 nTPM
FANTOM5:193.9 Scaled Tags Per Million
Pig:100.7 nTPM
Mouse:83.1 nTPM
Allen mouse:21.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA020044Antibody CAB022065
Glial cells HighHigh
Neuronal cells MediumMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 58.1
Sample id Sample description nTPM
Hippocampus
nTPM: 56.2
2529 Female, age 94, left hemisphere 60.5
1898 Male, age 80, left hemisphere 59.0
1911 Female, age 85, right hemisphere 57.2
1855 Male, age 76, left hemisphere 55.6
2621 Female, age 67, right hemisphere 54.1
2148 Female, age 91, left hemisphere 51.0
Dentate gyrus
nTPM: 53.2
2010 Male, age 76, both hemispheres 58.8
2530 Female, age 94, left hemisphere 58.7
2528 Male, age 74, both hemispheres 53.0
2246 Female, age 85, both hemispheres 52.5
1927 Female, age 91, both hemispheres 49.9
2531 Female, age 67, both hemispheres 46.1
Entorhinal gyrus
nTPM: 55.4
2117 Female, age 91, right hemisphere 59.1
1938 Female, age 85, left hemisphere 58.0
1787 Male, age 76, left hemisphere 55.2
2764 Male, age 80, right hemisphere 54.7
2686 Male, age 75, right hemisphere 53.0
2613 Female, age 94, left hemisphere 52.3
Hippocampus, CA1
nTPM: 55.0
1873 Female, age 85, both hemispheres 58.0
2527 Male, age 74, both hemispheres 56.9
2749 Male, age 80, left hemisphere 56.4
2045 Male, age 76, both hemispheres 53.8
2082 Female, age 91, right hemisphere 50.1
Hippocampus, CA2
nTPM: 54.6
2249 Male, age 74, both hemispheres 59.6
1963 Male, age 80, left hemisphere 55.6
1892 Male, age 76, both hemispheres 55.2
2113 Female, age 91, right hemisphere 53.1
1940 Female, age 85, left hemisphere 52.4
2437 Female, age 94, left hemisphere 51.3
Hippocampus, CA3
nTPM: 50.8
1891 Female, age 85, both hemispheres 59.2
1867 Male, age 76, both hemispheres 54.6
2137 Male, age 80, left hemisphere 51.6
2436 Male, age 74, both hemispheres 50.9
2620 Female, age 94, left hemisphere 44.4
2861 Female, age 67, both hemispheres 44.3
Parahippocampal cortex
nTPM: 55.0
1850 Male, age 80, both hemispheres 60.1
2018 Male, age 76, both hemispheres 58.7
1933 Female, age 85, both hemispheres 58.1
1990 Female, age 91, right hemisphere 56.9
2245 Female, age 91, both hemispheres 56.8
2532 Female, age 72, left hemisphere 56.0
2250 Female, age 67, right hemisphere 54.2
2692 Male, age 74, both hemispheres 53.3
2693 Female, age 94, both hemispheres 49.4
2622 Female, age 67, right hemisphere 46.1
Perirhinal gyrus
nTPM: 56.9
1841 Female, age 85, right hemisphere 60.6
2848 Male, age 76, right hemisphere 59.0
1794 Male, age 80, right hemisphere 57.9
2521 Female, age 94, right hemisphere 53.7
1847 Female, age 91, left hemisphere 53.5
Subiculum
nTPM: 58.1
2438 Female, age 94, left hemisphere 61.6
1977 Female, age 85, both hemispheres 61.0
1901 Male, age 80, both hemispheres 59.4
2042 Male, age 76, both hemispheres 57.5
2619 Male, age 74, both hemispheres 56.3
2729 Female, age 91, right hemisphere 52.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 64.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 64.9
Samples: 197

Max nTPM: 130.6
Min nTPM: 38.7
Std nTPM: 16.5
Median nTPM: 61.3
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 130.6
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 120.8
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 117.9
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 114.1
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 109.1
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 108.8
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 108.0
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 107.8
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 106.5
GTEX-ZAB4-0011-R1a-SM-4RGNO 40-49 years, male 105.7
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 103.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 193.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 193.9
FF:10153-102I9 76 years, female 235.1
FF:10169-103B7 60 years, female 152.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 100.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 70.8
Samples: 4

Max nTPM: 85.4
Min nTPM: 50.1
Sample A Female 85.4
Sample B Female 65.2
Sample C Male 82.4
Sample D Male 50.1
Entorhinal cortex
nTPM: 77.9
Samples: 4

Max nTPM: 87.3
Min nTPM: 69.2
Sample A Female 73.8
Sample B Female 87.3
Sample C Male 81.4
Sample D Male 69.2
Subiculum
nTPM: 100.7
Samples: 4

Max nTPM: 133.9
Min nTPM: 78.7
Sample A Female 133.9
Sample B Female 98.4
Sample C Male 91.8
Sample D Male 78.7
Ventral hippocampus
nTPM: 73.0
Samples: 4

Max nTPM: 79.1
Min nTPM: 66.8
Sample A Female 76.9
Sample B Female 69.3
Sample C Male 79.1
Sample D Male 66.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 83.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 83.2
Samples: 4

Max nTPM: 86.0
Min nTPM: 80.9
Sample A Male 86.0
Sample B Male 83.5
Sample C Female 82.2
Sample D Female 80.9
Hippocampal formation
nTPM: 71.7
Samples: 4

Max nTPM: 78.2
Min nTPM: 68.1
Sample A Male 78.2
Sample B Male 68.1
Sample C Female 69.7
Sample D Female 70.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 21.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 21.0
69817898 Antisense, RP_050510_03_H12, Mouse strain C57BL/6J (56 days, male) 21.0

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The Human Protein Atlas

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