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WASHC5
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:11.1 nTPM
HPA:11.1 nTPM
GTEx:9.6 nTPM
FANTOM5:28.6 Scaled Tags Per Million
Pig:23.0 nTPM
Mouse:21.8 nTPM
Allen mouse:0.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody CAB034216Antibody CAB034219
Glial cells HighLow
Neuronal cells MediumMedium




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 11.1
Sample id Sample description nTPM
Hippocampus
nTPM: 10.4
1855 Male, age 76, left hemisphere 10.9
1911 Female, age 85, right hemisphere 10.9
2529 Female, age 94, left hemisphere 10.7
1898 Male, age 80, left hemisphere 10.6
2148 Female, age 91, left hemisphere 10.0
2621 Female, age 67, right hemisphere 9.5
Dentate gyrus
nTPM: 10.0
2010 Male, age 76, both hemispheres 12.2
1927 Female, age 91, both hemispheres 10.5
2530 Female, age 94, left hemisphere 9.8
2246 Female, age 85, both hemispheres 9.7
2528 Male, age 74, both hemispheres 9.1
2531 Female, age 67, both hemispheres 8.5
Entorhinal gyrus
nTPM: 9.0
2117 Female, age 91, right hemisphere 12.9
1938 Female, age 85, left hemisphere 9.5
2764 Male, age 80, right hemisphere 9.3
1787 Male, age 76, left hemisphere 8.7
2686 Male, age 75, right hemisphere 7.2
2613 Female, age 94, left hemisphere 6.6
Hippocampus, CA1
nTPM: 9.6
2749 Male, age 80, left hemisphere 10.2
1873 Female, age 85, both hemispheres 10.0
2527 Male, age 74, both hemispheres 9.9
2045 Male, age 76, both hemispheres 9.0
2082 Female, age 91, right hemisphere 8.9
Hippocampus, CA2
nTPM: 10.8
1892 Male, age 76, both hemispheres 13.2
1963 Male, age 80, left hemisphere 12.3
2113 Female, age 91, right hemisphere 10.3
2249 Male, age 74, both hemispheres 9.9
2437 Female, age 94, left hemisphere 9.5
1940 Female, age 85, left hemisphere 9.4
Hippocampus, CA3
nTPM: 8.8
1867 Male, age 76, both hemispheres 12.4
1891 Female, age 85, both hemispheres 11.6
2436 Male, age 74, both hemispheres 9.3
2137 Male, age 80, left hemisphere 8.3
2861 Female, age 67, both hemispheres 5.6
2620 Female, age 94, left hemisphere 5.5
Parahippocampal cortex
nTPM: 9.1
2532 Female, age 72, left hemisphere 10.6
1990 Female, age 91, right hemisphere 10.5
2018 Male, age 76, both hemispheres 10.3
2692 Male, age 74, both hemispheres 9.8
1850 Male, age 80, both hemispheres 9.6
2245 Female, age 91, both hemispheres 9.0
1933 Female, age 85, both hemispheres 8.9
2693 Female, age 94, both hemispheres 8.2
2250 Female, age 67, right hemisphere 8.0
2622 Female, age 67, right hemisphere 6.5
Perirhinal gyrus
nTPM: 8.9
1794 Male, age 80, right hemisphere 9.2
2848 Male, age 76, right hemisphere 9.2
1841 Female, age 85, right hemisphere 8.8
1847 Female, age 91, left hemisphere 8.6
2521 Female, age 94, right hemisphere 8.5
Subiculum
nTPM: 11.1
2438 Female, age 94, left hemisphere 13.9
2042 Male, age 76, both hemispheres 11.7
1901 Male, age 80, both hemispheres 11.6
1977 Female, age 85, both hemispheres 10.6
2619 Male, age 74, both hemispheres 9.5
2729 Female, age 91, right hemisphere 9.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 9.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 9.6
Samples: 197

Max nTPM: 19.9
Min nTPM: 2.7
Std nTPM: 2.9
Median nTPM: 9.2
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 19.9
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 16.9
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 16.5
GTEX-15ER7-0011-R1b-SM-7KUE1 20-29 years, female 16.1
GTEX-1H1CY-0011-R1a-SM-CKZOZ 60-69 years, female 15.9
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 15.8
GTEX-1E2YA-0011-R1b-SM-CJI29 50-59 years, male 15.5
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 15.5
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 15.4
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 15.2
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 15.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 28.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 28.6
FF:10169-103B7 60 years, female 29.2
FF:10153-102I9 76 years, female 28.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 23.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 23.0
Samples: 4

Max nTPM: 27.3
Min nTPM: 18.1
Sample A Female 27.3
Sample B Female 20.5
Sample C Male 26.1
Sample D Male 18.1
Entorhinal cortex
nTPM: 20.3
Samples: 4

Max nTPM: 22.1
Min nTPM: 17.4
Sample A Female 22.1
Sample B Female 21.9
Sample C Male 19.7
Sample D Male 17.4
Subiculum
nTPM: 20.7
Samples: 4

Max nTPM: 25.1
Min nTPM: 18.8
Sample A Female 25.1
Sample B Female 19.7
Sample C Male 19.0
Sample D Male 18.8
Ventral hippocampus
nTPM: 19.8
Samples: 4

Max nTPM: 21.9
Min nTPM: 17.1
Sample A Female 21.9
Sample B Female 17.1
Sample C Male 18.9
Sample D Male 21.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 21.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 21.8
Samples: 4

Max nTPM: 23.8
Min nTPM: 20.7
Sample A Male 21.4
Sample B Male 20.7
Sample C Female 21.4
Sample D Female 23.8
Hippocampal formation
nTPM: 21.3
Samples: 4

Max nTPM: 22.2
Min nTPM: 19.7
Sample A Male 21.6
Sample B Male 21.8
Sample C Female 22.2
Sample D Female 19.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.6
68191114 Antisense, RP_041122_02_G08, Mouse strain C57BL/6J (56 days, male) 0.6

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The Human Protein Atlas

The Human Protein Atlas project is funded
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