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HNRNPK
MIDBRAIN - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:187.8 nTPM
HPA:187.8 nTPM
GTEx:189.1 nTPM
FANTOM5:433.1 Scaled Tags Per Million
Pig:197.1 nTPM
Mouse:339.2 nTPM
Allen mouse:2.6 Expression energy

MIDBRAIN - HPA Brain RNA-seq
Max nTPM 187.8
Sample id Sample description nTPM
Cuneiform nucleus
nTPM: 175.3
1870 Female, age 42, unknown 195.3
2411 Female, age 72, unknown 188.3
1827 Male, age 72, unknown 181.2
1833 Male, age 53, unknown 181.0
2019 Male, age 18, unknown 179.9
2828 Female, age 72, unknown 179.1
1830 Male, age 51, unknown 176.0
2219 Male, age 76, both hemispheres 173.2
2666 Male, age 74, left hemisphere 155.4
2586 Male, age 75, left hemisphere 143.8
Dorsal raphe nucleus
nTPM: 183.4
2298 Female, age 72, unknown 195.0
2750 Male, age 76, both hemispheres 187.8
2016 Female, age 72, unknown 179.7
1828 Male, age 53, unknown 178.1
2047 Male, age 72, unknown 176.3
Inferior colliculus
nTPM: 185.1
2097 Female, age 72, unknown 191.5
1848 Female, age 42, unknown 186.4
1890 Male, age 53, unknown 181.7
2849 Male, age 72, unknown 180.9
Median raphe nucleus
nTPM: 184.4
2220 Male, age 76, midline 184.4
Pedunculopontine tegmental nucleus
nTPM: 187.8
2338 Male, age 61, both hemispheres 189.6
2334 Male, age 80, both hemispheres 188.0
1921 Female, age 85, both hemispheres 185.8
Periaquaductal grey, anterior
nTPM: 176.9
1947 Male, age 18, unknown 182.3
2502 Female, age 75, unknown 178.6
1795 Male, age 51, unknown 169.8
Periaquaductal grey, dorsal
nTPM: 182.8
2850 Male, age 76, both hemispheres 199.8
1840 Male, age 53, unknown 179.5
1831 Male, age 72, unknown 176.2
2464 Female, age 72, unknown 175.9
Periaquaductal grey, lateral
nTPM: 187.3
2272 Male, age 74, both hemispheres 191.7
2140 Male, age 76, both hemispheres 187.9
2053 Male, age 18, unknown 182.4
Pretectal area
nTPM: 187.4
2273 Male, age 74, both hemispheres 203.9
2224 Female, age 72, unknown 191.5
2667 Female, age 75, unknown 191.5
1817 Female, age 42, unknown 189.9
1815 Male, age 53, unknown 188.2
1944 Female, age 72, unknown 186.4
2007 Male, age 72, unknown 186.1
1816 Male, age 51, unknown 184.1
2316 Male, age 76, right hemisphere 183.9
2825 Male, age 18, unknown 179.8
2407 Male, age 75, both hemispheres 176.2
Red nucleus
nTPM: 182.2
1821 Female, age 72, unknown 198.5
1865 Male, age 51, unknown 191.3
2823 Male, age 76, right hemisphere 189.7
1954 Female, age 42, unknown 187.8
1904 Male, age 53, unknown 187.1
2503 Female, age 72, unknown 187.0
2725 Female, age 75, unknown 184.8
2769 Male, age 72, unknown 184.0
2785 Male, age 18, unknown 182.4
2227 Male, age 72, unknown 180.8
2588 Male, age 74, left hemisphere 159.1
2584 Male, age 75, left hemisphere 154.0
Substantia nigra
nTPM: 178.2
1889 Female, age 72, unknown 189.9
1851 Male, age 51, unknown 182.0
2241 Male, age 72, unknown 181.1
1916 Female, age 42, unknown 179.0
2699 Male, age 18, unknown 178.3
1941 Male, age 53, unknown 177.8
2409 Female, age 72, unknown 176.9
2590 Female, age 75, unknown 176.2
2665 Male, age 74, both hemispheres 173.7
2583 Male, age 75, right hemisphere 167.2
Superior colliculus
nTPM: 179.9
2587 Male, age 74, left hemisphere 192.7
1913 Female, age 42, unknown 191.0
1895 Male, age 76, right hemisphere 189.1
1995 Male, age 72, unknown 184.3
2087 Female, age 72, unknown 182.1
1839 Male, age 51, unknown 178.7
1796 Male, age 53, unknown 178.4
2261 Male, age 18, unknown 177.6
2668 Female, age 75, unknown 172.2
2664 Male, age 75, both hemispheres 153.2
Ventral tegmental area
nTPM: 181.3
2410 Female, age 72, unknown 186.6
2218 Male, age 76, both hemispheres 183.4
2223 Female, age 72, unknown 182.0
1915 Female, age 42, unknown 180.2
2021 Male, age 53, unknown 179.3
1942 Male, age 51, unknown 176.4

MIDBRAIN - GTEx RNA-seqi
Average nTPM 189.1
GTEx sample id Sample description nTPM
Brain - Substantia nigra
Average nTPM: 189.1
Samples: 139

Max nTPM: 267.8
Min nTPM: 130.9
Std nTPM: 28.4
Median nTPM: 183.7
GTEX-1J8Q2-0011-R2b-SM-EAZ2X 60-69 years, male 267.8
GTEX-X4XX-0011-R2A-SM-3P623 60-69 years, male 264.4
GTEX-1H1ZS-0011-R2b-SM-CL54Q 70-79 years, male 262.5
GTEX-1JMQK-0011-R2a-SM-EYYXQ 60-69 years, male 254.9
GTEX-13SLW-0011-R2b-SM-5O9C6 70-79 years, male 239.2
GTEX-ZAB4-0011-R2a-SM-4RGNP 40-49 years, male 237.9
GTEX-12WSH-0011-R2a-SM-5GU68 50-59 years, male 237.4
GTEX-1I1GS-0011-R2b-SM-CMKHG 60-69 years, male 236.2
GTEX-1H1DG-0011-R2a-SM-ADEIQ 70-79 years, male 235.6
GTEX-11UD1-0011-R2b-SM-5BC6O 40-49 years, female 235.4
GTEX-13NYB-0011-R2a-SM-5MR3C 40-49 years, male 234.8
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MIDBRAIN - FANTOM5 CAGEi
Max Scaled Tags Per Million 433.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Substantia nigra
Scaled Tags Per Million: 433.1
FF:10158-103A5 76 years, female 433.1

MIDBRAIN - Pig RNA-seqi
Average nTPM 197.1
Pig sample Sample description nTPM
Midbrain
nTPM: 197.2
Samples: 4

Max nTPM: 256.0
Min nTPM: 166.5
Sample A Female 256.0
Sample B Female 182.3
Sample C Male 183.8
Sample D Male 166.5
Periaqueductal gray
nTPM: 171.4
Samples: 3

Max nTPM: 179.2
Min nTPM: 164.1
Sample B Female 171.0
Sample C Male 179.2
Sample D Male 164.1
Substantia nigra
nTPM: 177.8
Samples: 4

Max nTPM: 197.5
Min nTPM: 168.5
Sample A Female 197.5
Sample B Female 172.2
Sample C Male 168.5
Sample D Male 172.8
Superior colliculi
nTPM: 197.1
Samples: 4

Max nTPM: 215.0
Min nTPM: 177.7
Sample A Female 202.3
Sample B Female 215.0
Sample C Male 193.3
Sample D Male 177.7

MIDBRAIN - Mouse RNA-seqi
Average nTPM 339.2
Mouse sample Sample description nTPM
Midbrain
nTPM: 339.2
Samples: 4

Max nTPM: 350.8
Min nTPM: 325.7
Sample A Male 325.7
Sample B Male 350.8
Sample C Female 349.5
Sample D Female 330.6

MIDBRAIN - Allen Mouse ISHi
Max Expression energy 2.6
Allen experiment id Experiment description Expression energy
Midbrain
Expression energy: 2.6
68443003 Antisense, RP_050111_01_B10, Mouse strain C57BL/6J (56 days, male) 2.6

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The Human Protein Atlas

The Human Protein Atlas project is funded
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