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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: High
RNA expressioni
Consensus:188.8 nTPM
HPA:188.8 nTPM
GTEx:184.4 nTPM
FANTOM5:433.5 Scaled Tags Per Million
Pig:177.1 nTPM
Mouse:356.9 nTPM
Allen mouse:8.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA007644Antibody CAB004435Antibody CAB016225
Glial cells HighHighHigh
Neuronal cells HighHighHigh







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 188.8
Sample id Sample description nTPM
Hippocampus
nTPM: 181.6
1898 Male, age 80, left hemisphere 193.3
1911 Female, age 85, right hemisphere 184.0
2621 Female, age 67, right hemisphere 182.5
2529 Female, age 94, left hemisphere 181.3
1855 Male, age 76, left hemisphere 180.2
2148 Female, age 91, left hemisphere 168.4
Dentate gyrus
nTPM: 179.1
2010 Male, age 76, both hemispheres 190.9
1927 Female, age 91, both hemispheres 187.8
2528 Male, age 74, both hemispheres 181.1
2246 Female, age 85, both hemispheres 180.5
2530 Female, age 94, left hemisphere 170.2
2531 Female, age 67, both hemispheres 163.8
Entorhinal gyrus
nTPM: 174.4
1938 Female, age 85, left hemisphere 190.1
2117 Female, age 91, right hemisphere 185.0
2764 Male, age 80, right hemisphere 178.0
1787 Male, age 76, left hemisphere 175.2
2613 Female, age 94, left hemisphere 160.9
2686 Male, age 75, right hemisphere 157.2
Hippocampus, CA1
nTPM: 184.9
2749 Male, age 80, left hemisphere 193.5
1873 Female, age 85, both hemispheres 192.7
2527 Male, age 74, both hemispheres 187.7
2045 Male, age 76, both hemispheres 179.5
2082 Female, age 91, right hemisphere 171.2
Hippocampus, CA2
nTPM: 182.6
2249 Male, age 74, both hemispheres 203.6
1892 Male, age 76, both hemispheres 187.2
1963 Male, age 80, left hemisphere 179.7
1940 Female, age 85, left hemisphere 178.7
2113 Female, age 91, right hemisphere 173.8
2437 Female, age 94, left hemisphere 172.8
Hippocampus, CA3
nTPM: 181.0
2436 Male, age 74, both hemispheres 205.8
1891 Female, age 85, both hemispheres 189.8
2137 Male, age 80, left hemisphere 185.0
1867 Male, age 76, both hemispheres 183.3
2620 Female, age 94, left hemisphere 166.3
2861 Female, age 67, both hemispheres 155.7
Parahippocampal cortex
nTPM: 178.4
1850 Male, age 80, both hemispheres 189.1
1933 Female, age 85, both hemispheres 186.7
1990 Female, age 91, right hemisphere 186.3
2250 Female, age 67, right hemisphere 183.8
2018 Male, age 76, both hemispheres 182.7
2245 Female, age 91, both hemispheres 180.1
2532 Female, age 72, left hemisphere 177.2
2693 Female, age 94, both hemispheres 172.6
2692 Male, age 74, both hemispheres 168.4
2622 Female, age 67, right hemisphere 157.3
Perirhinal gyrus
nTPM: 188.8
1841 Female, age 85, right hemisphere 202.1
1847 Female, age 91, left hemisphere 196.7
1794 Male, age 80, right hemisphere 183.5
2848 Male, age 76, right hemisphere 181.0
2521 Female, age 94, right hemisphere 180.8
Subiculum
nTPM: 183.2
1977 Female, age 85, both hemispheres 189.7
2042 Male, age 76, both hemispheres 187.7
1901 Male, age 80, both hemispheres 184.8
2438 Female, age 94, left hemisphere 182.2
2619 Male, age 74, both hemispheres 181.1
2729 Female, age 91, right hemisphere 174.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 184.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 184.4
Samples: 197

Max nTPM: 261.1
Min nTPM: 121.1
Std nTPM: 24.8
Median nTPM: 181.1
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 261.1
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 251.5
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 245.4
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 240.8
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 240.7
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 235.9
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 233.7
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 232.7
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 231.4
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 229.7
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 227.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 433.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 433.5
FF:10169-103B7 60 years, female 514.8
FF:10153-102I9 76 years, female 352.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 177.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 177.1
Samples: 4

Max nTPM: 212.1
Min nTPM: 143.4
Sample A Female 212.1
Sample B Female 168.9
Sample C Male 184.0
Sample D Male 143.4
Entorhinal cortex
nTPM: 150.4
Samples: 4

Max nTPM: 178.4
Min nTPM: 119.7
Sample A Female 152.3
Sample B Female 178.4
Sample C Male 151.1
Sample D Male 119.7
Subiculum
nTPM: 156.8
Samples: 4

Max nTPM: 189.1
Min nTPM: 140.9
Sample A Female 189.1
Sample B Female 152.6
Sample C Male 140.9
Sample D Male 144.4
Ventral hippocampus
nTPM: 159.3
Samples: 4

Max nTPM: 168.7
Min nTPM: 136.0
Sample A Female 168.7
Sample B Female 136.0
Sample C Male 165.9
Sample D Male 166.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 356.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 325.3
Samples: 4

Max nTPM: 332.8
Min nTPM: 309.3
Sample A Male 309.3
Sample B Male 330.9
Sample C Female 332.8
Sample D Female 328.3
Hippocampal formation
nTPM: 356.9
Samples: 4

Max nTPM: 375.4
Min nTPM: 331.3
Sample A Male 375.4
Sample B Male 352.2
Sample C Female 368.6
Sample D Female 331.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 8.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 8.5
68443003 Antisense, RP_050111_01_B10, Mouse strain C57BL/6J (56 days, male) 8.5

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The Human Protein Atlas

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