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HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:10.9 nTPM
HPA:10.9 nTPM
GTEx:6.0 nTPM
FANTOM5:8.3 Scaled Tags Per Million
Pig:11.3 nTPM
Mouse:1.4 nTPM
Allen mouse:0.7 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 10.9
Sample id Sample description nTPM
Hippocampus
nTPM: 10.9
2621 Female, age 67, right hemisphere 13.5
1898 Male, age 80, left hemisphere 12.2
2529 Female, age 94, left hemisphere 10.9
1855 Male, age 76, left hemisphere 10.0
1911 Female, age 85, right hemisphere 9.9
2148 Female, age 91, left hemisphere 9.0
Dentate gyrus
nTPM: 9.5
1927 Female, age 91, both hemispheres 9.9
2530 Female, age 94, left hemisphere 9.7
2246 Female, age 85, both hemispheres 9.6
2531 Female, age 67, both hemispheres 9.6
2528 Male, age 74, both hemispheres 9.1
2010 Male, age 76, both hemispheres 8.9
Entorhinal gyrus
nTPM: 9.7
2117 Female, age 91, right hemisphere 11.2
1787 Male, age 76, left hemisphere 10.2
1938 Female, age 85, left hemisphere 10.2
2764 Male, age 80, right hemisphere 9.6
2613 Female, age 94, left hemisphere 8.8
2686 Male, age 75, right hemisphere 8.5
Hippocampus, CA1
nTPM: 9.0
2527 Male, age 74, both hemispheres 9.6
2082 Female, age 91, right hemisphere 9.4
1873 Female, age 85, both hemispheres 9.1
2045 Male, age 76, both hemispheres 8.6
2749 Male, age 80, left hemisphere 8.3
Hippocampus, CA2
nTPM: 10.7
1940 Female, age 85, left hemisphere 14.1
1963 Male, age 80, left hemisphere 10.7
2437 Female, age 94, left hemisphere 10.5
2113 Female, age 91, right hemisphere 10.2
1892 Male, age 76, both hemispheres 9.9
2249 Male, age 74, both hemispheres 8.9
Hippocampus, CA3
nTPM: 9.2
1867 Male, age 76, both hemispheres 10.6
1891 Female, age 85, both hemispheres 9.6
2137 Male, age 80, left hemisphere 9.4
2861 Female, age 67, both hemispheres 9.3
2436 Male, age 74, both hemispheres 9.2
2620 Female, age 94, left hemisphere 7.3
Parahippocampal cortex
nTPM: 10.4
2250 Female, age 67, right hemisphere 16.3
2018 Male, age 76, both hemispheres 11.3
2693 Female, age 94, both hemispheres 10.2
1850 Male, age 80, both hemispheres 10.1
2245 Female, age 91, both hemispheres 9.9
1990 Female, age 91, right hemisphere 9.6
2532 Female, age 72, left hemisphere 9.5
2692 Male, age 74, both hemispheres 9.0
1933 Female, age 85, both hemispheres 8.9
2622 Female, age 67, right hemisphere 8.8
Perirhinal gyrus
nTPM: 10.2
2521 Female, age 94, right hemisphere 12.6
1794 Male, age 80, right hemisphere 10.7
1847 Female, age 91, left hemisphere 9.4
1841 Female, age 85, right hemisphere 9.3
2848 Male, age 76, right hemisphere 9.1
Subiculum
nTPM: 9.6
2438 Female, age 94, left hemisphere 11.0
2619 Male, age 74, both hemispheres 10.1
2042 Male, age 76, both hemispheres 9.4
2729 Female, age 91, right hemisphere 9.3
1901 Male, age 80, both hemispheres 9.1
1977 Female, age 85, both hemispheres 8.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 6.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 6.0
Samples: 197

Max nTPM: 28.3
Min nTPM: 0.5
Std nTPM: 4.4
Median nTPM: 4.5
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 28.3
GTEX-NPJ7-0011-R1a-SM-3GACT 60-69 years, female 24.7
GTEX-15DCD-0011-R1b-SM-6LPIJ 70-79 years, female 19.4
GTEX-131YS-0011-R1a-SM-5DUXC 60-69 years, female 17.9
GTEX-14E7W-0011-R1b-SM-5YYAT 70-79 years, male 17.9
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 16.1
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 15.8
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 15.2
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 14.3
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 14.2
GTEX-1F75W-0011-R1a-SM-ARU81 60-69 years, male 13.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 8.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 8.3
FF:10169-103B7 60 years, female 8.3
FF:10153-102I9 76 years, female 8.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 11.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 7.2
Samples: 4

Max nTPM: 10.7
Min nTPM: 4.1
Sample A Female 7.7
Sample B Female 6.4
Sample C Male 10.7
Sample D Male 4.1
Entorhinal cortex
nTPM: 10.3
Samples: 4

Max nTPM: 11.8
Min nTPM: 8.1
Sample A Female 9.6
Sample B Female 11.8
Sample C Male 11.6
Sample D Male 8.1
Subiculum
nTPM: 11.4
Samples: 4

Max nTPM: 14.8
Min nTPM: 8.7
Sample A Female 14.8
Sample B Female 10.6
Sample C Male 11.3
Sample D Male 8.7
Ventral hippocampus
nTPM: 10.2
Samples: 4

Max nTPM: 15.0
Min nTPM: 7.4
Sample A Female 10.9
Sample B Female 7.5
Sample C Male 15.0
Sample D Male 7.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 1.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 1.4
Samples: 4

Max nTPM: 1.8
Min nTPM: 0.5
Sample A Male 0.5
Sample B Male 1.8
Sample C Female 1.6
Sample D Female 1.7
Hippocampal formation
nTPM: 0.8
Samples: 4

Max nTPM: 1.4
Min nTPM: 0.5
Sample A Male 0.7
Sample B Male 0.5
Sample C Female 0.5
Sample D Female 1.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.7
1717 Antisense, RP_040604_01_H08, Mouse strain C57BL/6J (56 days, male) 0.7
1718 Antisense, RP_040604_01_H08, Mouse strain C57BL/6J (56 days, male) 0.1

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