ABOUTMENU
HELP
NEWS
NGB
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:15.2 nTPM
HPA:15.2 nTPM
GTEx:4.4 nTPM
FANTOM5:0.0 Scaled Tags Per Million
Pig:4.8 nTPM
Mouse:9.9 nTPM
Allen mouse:0.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA042615Antibody HPA058596
Glial cells Not detectedHigh
Neuronal cells Not detectedHigh





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 15.2
Sample id Sample description nTPM
Hippocampus
nTPM: 11.7
2529 Female, age 94, left hemisphere 12.5
2148 Female, age 91, left hemisphere 12.0
2621 Female, age 67, right hemisphere 11.8
1898 Male, age 80, left hemisphere 11.5
1855 Male, age 76, left hemisphere 11.2
1911 Female, age 85, right hemisphere 11.2
Dentate gyrus
nTPM: 11.9
1927 Female, age 91, both hemispheres 13.5
2528 Male, age 74, both hemispheres 11.9
2531 Female, age 67, both hemispheres 11.9
2530 Female, age 94, left hemisphere 11.8
2246 Female, age 85, both hemispheres 11.3
2010 Male, age 76, both hemispheres 11.2
Entorhinal gyrus
nTPM: 13.5
2686 Male, age 75, right hemisphere 14.9
2613 Female, age 94, left hemisphere 13.6
2764 Male, age 80, right hemisphere 13.6
2117 Female, age 91, right hemisphere 13.2
1938 Female, age 85, left hemisphere 13.1
1787 Male, age 76, left hemisphere 12.5
Hippocampus, CA1
nTPM: 11.5
2527 Male, age 74, both hemispheres 12.2
2082 Female, age 91, right hemisphere 11.9
2045 Male, age 76, both hemispheres 11.5
1873 Female, age 85, both hemispheres 11.2
2749 Male, age 80, left hemisphere 10.8
Hippocampus, CA2
nTPM: 11.6
2437 Female, age 94, left hemisphere 12.5
2113 Female, age 91, right hemisphere 11.9
1940 Female, age 85, left hemisphere 11.7
2249 Male, age 74, both hemispheres 11.7
1892 Male, age 76, both hemispheres 11.2
1963 Male, age 80, left hemisphere 10.9
Hippocampus, CA3
nTPM: 11.6
2861 Female, age 67, both hemispheres 12.7
2436 Male, age 74, both hemispheres 12.3
2620 Female, age 94, left hemisphere 11.5
1867 Male, age 76, both hemispheres 11.2
1891 Female, age 85, both hemispheres 11.2
2137 Male, age 80, left hemisphere 10.9
Parahippocampal cortex
nTPM: 14.1
2693 Female, age 94, both hemispheres 16.7
2622 Female, age 67, right hemisphere 16.6
2532 Female, age 72, left hemisphere 14.4
1933 Female, age 85, both hemispheres 13.7
2018 Male, age 76, both hemispheres 13.6
1850 Male, age 80, both hemispheres 13.5
2245 Female, age 91, both hemispheres 13.5
2692 Male, age 74, both hemispheres 13.1
2250 Female, age 67, right hemisphere 13.0
1990 Female, age 91, right hemisphere 12.8
Perirhinal gyrus
nTPM: 15.2
1841 Female, age 85, right hemisphere 17.7
2848 Male, age 76, right hemisphere 16.5
1794 Male, age 80, right hemisphere 16.2
2521 Female, age 94, right hemisphere 12.9
1847 Female, age 91, left hemisphere 12.6
Subiculum
nTPM: 11.9
2619 Male, age 74, both hemispheres 12.9
1977 Female, age 85, both hemispheres 12.3
2438 Female, age 94, left hemisphere 12.1
2729 Female, age 91, right hemisphere 11.9
1901 Male, age 80, both hemispheres 11.0
2042 Male, age 76, both hemispheres 10.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 4.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 4.4
Samples: 197

Max nTPM: 51.2
Min nTPM: 0.0
Std nTPM: 5.3
Median nTPM: 3.1
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 51.2
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 32.1
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 26.1
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 19.0
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 18.6
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 16.7
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 15.8
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 15.7
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 15.2
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 14.5
GTEX-183WM-0011-R1a-SM-718A8 70-79 years, female 12.8
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 0.0
FF:10153-102I9 76 years, female 0.1
FF:10169-103B7 60 years, female 0.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 4.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 2.4
Samples: 4

Max nTPM: 3.2
Min nTPM: 1.4
Sample A Female 2.3
Sample B Female 2.7
Sample C Male 3.2
Sample D Male 1.4
Entorhinal cortex
nTPM: 4.8
Samples: 4

Max nTPM: 6.4
Min nTPM: 2.3
Sample A Female 6.4
Sample B Female 4.4
Sample C Male 6.2
Sample D Male 2.3
Subiculum
nTPM: 4.2
Samples: 4

Max nTPM: 6.6
Min nTPM: 1.5
Sample A Female 6.6
Sample B Female 4.3
Sample C Male 4.3
Sample D Male 1.5
Ventral hippocampus
nTPM: 4.3
Samples: 4

Max nTPM: 8.3
Min nTPM: 1.2
Sample A Female 4.1
Sample B Female 3.5
Sample C Male 8.3
Sample D Male 1.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 9.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 9.9
Samples: 4

Max nTPM: 13.7
Min nTPM: 7.2
Sample A Male 7.2
Sample B Male 9.3
Sample C Female 9.5
Sample D Female 13.7
Hippocampal formation
nTPM: 4.2
Samples: 4

Max nTPM: 7.5
Min nTPM: 1.8
Sample A Male 7.5
Sample B Male 2.3
Sample C Female 1.8
Sample D Female 5.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.4
79670444 Antisense, RP_071204_01_D11, Mouse strain C57BL/6J (56 days, male) 0.4
79556712 Antisense, RP_071204_01_D11, Mouse strain C57BL/6J (56 days, male) 0.1

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.