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VDAC2
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: High
RNA expressioni
Consensus:99.0 nTPM
HPA:99.0 nTPM
GTEx:100.0 nTPM
FANTOM5:109.9 Scaled Tags Per Million
Pig:132.2 nTPM
Mouse:249.7 nTPM
Allen mouse:7.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA043475
Glial cells Not detected
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 99.0
Sample id Sample description nTPM
Hippocampus
nTPM: 92.7
1898 Male, age 80, left hemisphere 107.6
1855 Male, age 76, left hemisphere 91.3
2529 Female, age 94, left hemisphere 91.2
2148 Female, age 91, left hemisphere 90.1
1911 Female, age 85, right hemisphere 88.3
2621 Female, age 67, right hemisphere 87.4
Dentate gyrus
nTPM: 93.4
1927 Female, age 91, both hemispheres 101.7
2010 Male, age 76, both hemispheres 97.8
2528 Male, age 74, both hemispheres 95.5
2246 Female, age 85, both hemispheres 90.5
2530 Female, age 94, left hemisphere 90.2
2531 Female, age 67, both hemispheres 84.9
Entorhinal gyrus
nTPM: 92.5
2764 Male, age 80, right hemisphere 99.1
1938 Female, age 85, left hemisphere 97.7
2117 Female, age 91, right hemisphere 95.7
1787 Male, age 76, left hemisphere 88.8
2613 Female, age 94, left hemisphere 87.5
2686 Male, age 75, right hemisphere 86.2
Hippocampus, CA1
nTPM: 99.0
2749 Male, age 80, left hemisphere 114.7
1873 Female, age 85, both hemispheres 100.6
2527 Male, age 74, both hemispheres 97.0
2082 Female, age 91, right hemisphere 93.1
2045 Male, age 76, both hemispheres 89.7
Hippocampus, CA2
nTPM: 96.1
1963 Male, age 80, left hemisphere 105.2
1892 Male, age 76, both hemispheres 103.3
2249 Male, age 74, both hemispheres 103.0
2113 Female, age 91, right hemisphere 90.9
1940 Female, age 85, left hemisphere 88.3
2437 Female, age 94, left hemisphere 85.7
Hippocampus, CA3
nTPM: 95.7
2137 Male, age 80, left hemisphere 104.1
2436 Male, age 74, both hemispheres 103.9
1867 Male, age 76, both hemispheres 100.3
1891 Female, age 85, both hemispheres 93.9
2620 Female, age 94, left hemisphere 90.3
2861 Female, age 67, both hemispheres 81.6
Parahippocampal cortex
nTPM: 92.8
1850 Male, age 80, both hemispheres 101.2
1990 Female, age 91, right hemisphere 99.8
1933 Female, age 85, both hemispheres 98.3
2250 Female, age 67, right hemisphere 96.3
2018 Male, age 76, both hemispheres 91.9
2245 Female, age 91, both hemispheres 90.8
2532 Female, age 72, left hemisphere 89.7
2693 Female, age 94, both hemispheres 89.5
2622 Female, age 67, right hemisphere 86.0
2692 Male, age 74, both hemispheres 84.2
Perirhinal gyrus
nTPM: 98.4
1847 Female, age 91, left hemisphere 106.0
1794 Male, age 80, right hemisphere 102.3
1841 Female, age 85, right hemisphere 100.3
2521 Female, age 94, right hemisphere 92.9
2848 Male, age 76, right hemisphere 90.7
Subiculum
nTPM: 91.7
1901 Male, age 80, both hemispheres 99.5
1977 Female, age 85, both hemispheres 98.6
2619 Male, age 74, both hemispheres 91.1
2729 Female, age 91, right hemisphere 90.3
2042 Male, age 76, both hemispheres 87.2
2438 Female, age 94, left hemisphere 83.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 100.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 100.0
Samples: 197

Max nTPM: 202.6
Min nTPM: 56.6
Std nTPM: 22.9
Median nTPM: 95.5
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 202.6
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 160.4
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 150.7
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 148.1
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 146.1
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 146.0
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 144.5
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 144.3
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 142.9
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 142.9
GTEX-TSE9-0011-R1A-SM-3DB7E 60-69 years, female 141.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 109.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 109.9
FF:10169-103B7 60 years, female 138.1
FF:10153-102I9 76 years, female 81.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 132.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 132.2
Samples: 4

Max nTPM: 171.2
Min nTPM: 98.2
Sample A Female 171.2
Sample B Female 123.9
Sample C Male 135.4
Sample D Male 98.2
Entorhinal cortex
nTPM: 110.6
Samples: 4

Max nTPM: 131.2
Min nTPM: 92.2
Sample A Female 112.4
Sample B Female 131.2
Sample C Male 106.7
Sample D Male 92.2
Subiculum
nTPM: 111.6
Samples: 4

Max nTPM: 143.4
Min nTPM: 98.8
Sample A Female 143.4
Sample B Female 98.9
Sample C Male 105.2
Sample D Male 98.8
Ventral hippocampus
nTPM: 123.6
Samples: 4

Max nTPM: 141.3
Min nTPM: 86.7
Sample A Female 141.3
Sample B Female 86.7
Sample C Male 139.3
Sample D Male 126.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 249.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 238.9
Samples: 4

Max nTPM: 242.1
Min nTPM: 234.4
Sample A Male 237.2
Sample B Male 242.1
Sample C Female 241.9
Sample D Female 234.4
Hippocampal formation
nTPM: 249.8
Samples: 4

Max nTPM: 266.8
Min nTPM: 234.8
Sample A Male 266.8
Sample B Male 245.9
Sample C Female 234.8
Sample D Female 251.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 7.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 7.5
1888 Antisense, RP_Baylor_103100, Mouse strain C57BL/6J (56 days, male) 7.5
1889 Antisense, RP_Baylor_103100, Mouse strain C57BL/6J (56 days, male) 1.3

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.