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HPRT1
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: High
RNA expressioni
Consensus:40.3 nTPM
HPA:40.3 nTPM
GTEx:47.8 nTPM
FANTOM5:86.5 Scaled Tags Per Million
Pig:65.6 nTPM
Mouse:243.5 nTPM
Allen mouse:11.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA006360Antibody CAB012200
Glial cells MediumNot detected
Neuronal cells HighHigh





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 40.3
Sample id Sample description nTPM
Hippocampus
nTPM: 26.3
1898 Male, age 80, left hemisphere 37.4
1855 Male, age 76, left hemisphere 28.6
2621 Female, age 67, right hemisphere 26.4
1911 Female, age 85, right hemisphere 22.8
2529 Female, age 94, left hemisphere 21.4
2148 Female, age 91, left hemisphere 21.3
Dentate gyrus
nTPM: 27.7
1927 Female, age 91, both hemispheres 36.2
2010 Male, age 76, both hemispheres 30.5
2246 Female, age 85, both hemispheres 26.6
2530 Female, age 94, left hemisphere 24.7
2528 Male, age 74, both hemispheres 24.4
2531 Female, age 67, both hemispheres 23.9
Entorhinal gyrus
nTPM: 28.1
1938 Female, age 85, left hemisphere 32.7
2764 Male, age 80, right hemisphere 32.5
2613 Female, age 94, left hemisphere 30.8
1787 Male, age 76, left hemisphere 27.5
2686 Male, age 75, right hemisphere 25.2
2117 Female, age 91, right hemisphere 19.7
Hippocampus, CA1
nTPM: 30.9
2749 Male, age 80, left hemisphere 41.6
1873 Female, age 85, both hemispheres 32.5
2045 Male, age 76, both hemispheres 30.7
2082 Female, age 91, right hemisphere 24.9
2527 Male, age 74, both hemispheres 24.8
Hippocampus, CA2
nTPM: 28.7
1892 Male, age 76, both hemispheres 38.6
1963 Male, age 80, left hemisphere 33.9
1940 Female, age 85, left hemisphere 26.9
2113 Female, age 91, right hemisphere 25.2
2437 Female, age 94, left hemisphere 24.1
2249 Male, age 74, both hemispheres 23.2
Hippocampus, CA3
nTPM: 27.5
2137 Male, age 80, left hemisphere 32.5
1867 Male, age 76, both hemispheres 31.7
1891 Female, age 85, both hemispheres 25.9
2620 Female, age 94, left hemisphere 25.9
2436 Male, age 74, both hemispheres 25.3
2861 Female, age 67, both hemispheres 23.5
Parahippocampal cortex
nTPM: 31.3
1850 Male, age 80, both hemispheres 41.5
2693 Female, age 94, both hemispheres 36.9
1990 Female, age 91, right hemisphere 34.6
2245 Female, age 91, both hemispheres 33.1
1933 Female, age 85, both hemispheres 32.5
2250 Female, age 67, right hemisphere 30.7
2018 Male, age 76, both hemispheres 30.3
2532 Female, age 72, left hemisphere 29.4
2622 Female, age 67, right hemisphere 22.4
2692 Male, age 74, both hemispheres 21.8
Perirhinal gyrus
nTPM: 40.3
1847 Female, age 91, left hemisphere 44.7
1841 Female, age 85, right hemisphere 44.6
1794 Male, age 80, right hemisphere 40.9
2521 Female, age 94, right hemisphere 35.9
2848 Male, age 76, right hemisphere 35.5
Subiculum
nTPM: 24.1
1977 Female, age 85, both hemispheres 30.7
1901 Male, age 80, both hemispheres 27.0
2042 Male, age 76, both hemispheres 23.9
2438 Female, age 94, left hemisphere 21.7
2619 Male, age 74, both hemispheres 21.5
2729 Female, age 91, right hemisphere 19.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 47.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 47.8
Samples: 197

Max nTPM: 211.7
Min nTPM: 7.3
Std nTPM: 30.7
Median nTPM: 42.8
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 211.7
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 164.3
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 122.2
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 117.8
GTEX-14JIY-0011-R1a-SM-68713 60-69 years, male 117.5
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 110.7
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 105.3
GTEX-X585-0011-R1B-SM-46MVE 50-59 years, male 101.7
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 100.0
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 98.4
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 98.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 86.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 86.5
FF:10169-103B7 60 years, female 136.0
FF:10153-102I9 76 years, female 37.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 65.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 63.0
Samples: 4

Max nTPM: 78.0
Min nTPM: 47.7
Sample A Female 78.0
Sample B Female 65.3
Sample C Male 60.9
Sample D Male 47.7
Entorhinal cortex
nTPM: 65.3
Samples: 4

Max nTPM: 72.2
Min nTPM: 56.6
Sample A Female 68.9
Sample B Female 72.2
Sample C Male 63.5
Sample D Male 56.6
Subiculum
nTPM: 64.1
Samples: 4

Max nTPM: 84.8
Min nTPM: 54.8
Sample A Female 84.8
Sample B Female 56.6
Sample C Male 60.0
Sample D Male 54.8
Ventral hippocampus
nTPM: 65.6
Samples: 4

Max nTPM: 83.0
Min nTPM: 49.4
Sample A Female 83.0
Sample B Female 49.4
Sample C Male 75.1
Sample D Male 55.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 243.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 243.6
Samples: 4

Max nTPM: 270.2
Min nTPM: 226.6
Sample A Male 232.9
Sample B Male 270.2
Sample C Female 244.5
Sample D Female 226.6
Hippocampal formation
nTPM: 239.5
Samples: 4

Max nTPM: 290.6
Min nTPM: 215.8
Sample A Male 290.6
Sample B Male 215.8
Sample C Female 217.3
Sample D Female 234.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 11.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 11.4
68269059 Antisense, RP_041208_01_G10, Mouse strain C57BL/6J (56 days, male) 11.4

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The Human Protein Atlas

The Human Protein Atlas project is funded
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