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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:23.9 nTPM
HPA:23.9 nTPM
GTEx:17.0 nTPM
FANTOM5:30.9 Scaled Tags Per Million
Pig:1.3 nTPM
Mouse:2.3 nTPM
Allen mouse:0.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA037845
Glial cells Not detected
Neuronal cells Not detected


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 23.9
Sample id Sample description nTPM
Hippocampus
nTPM: 23.0
2529 Female, age 94, left hemisphere 26.4
2148 Female, age 91, left hemisphere 24.3
1911 Female, age 85, right hemisphere 22.9
1855 Male, age 76, left hemisphere 21.9
1898 Male, age 80, left hemisphere 21.4
2621 Female, age 67, right hemisphere 21.2
Dentate gyrus
nTPM: 20.8
2528 Male, age 74, both hemispheres 24.2
2246 Female, age 85, both hemispheres 22.5
1927 Female, age 91, both hemispheres 21.8
2010 Male, age 76, both hemispheres 18.9
2530 Female, age 94, left hemisphere 18.9
2531 Female, age 67, both hemispheres 18.8
Entorhinal gyrus
nTPM: 22.2
2117 Female, age 91, right hemisphere 25.4
1938 Female, age 85, left hemisphere 23.3
1787 Male, age 76, left hemisphere 22.8
2686 Male, age 75, right hemisphere 22.7
2764 Male, age 80, right hemisphere 20.2
2613 Female, age 94, left hemisphere 18.6
Hippocampus, CA1
nTPM: 22.8
2527 Male, age 74, both hemispheres 29.2
2082 Female, age 91, right hemisphere 23.3
1873 Female, age 85, both hemispheres 22.8
2749 Male, age 80, left hemisphere 19.7
2045 Male, age 76, both hemispheres 18.9
Hippocampus, CA2
nTPM: 21.5
2113 Female, age 91, right hemisphere 25.0
2249 Male, age 74, both hemispheres 24.0
1940 Female, age 85, left hemisphere 21.2
1963 Male, age 80, left hemisphere 20.4
2437 Female, age 94, left hemisphere 19.2
1892 Male, age 76, both hemispheres 19.0
Hippocampus, CA3
nTPM: 21.4
2436 Male, age 74, both hemispheres 26.5
1891 Female, age 85, both hemispheres 22.7
2861 Female, age 67, both hemispheres 21.7
2137 Male, age 80, left hemisphere 19.8
1867 Male, age 76, both hemispheres 19.4
2620 Female, age 94, left hemisphere 18.6
Parahippocampal cortex
nTPM: 23.9
2692 Male, age 74, both hemispheres 28.5
2622 Female, age 67, right hemisphere 26.2
2250 Female, age 67, right hemisphere 25.5
2245 Female, age 91, both hemispheres 24.4
1933 Female, age 85, both hemispheres 24.1
1990 Female, age 91, right hemisphere 23.6
1850 Male, age 80, both hemispheres 22.9
2693 Female, age 94, both hemispheres 22.4
2532 Female, age 72, left hemisphere 20.9
2018 Male, age 76, both hemispheres 20.7
Perirhinal gyrus
nTPM: 23.4
1841 Female, age 85, right hemisphere 24.7
1847 Female, age 91, left hemisphere 24.7
2521 Female, age 94, right hemisphere 23.0
1794 Male, age 80, right hemisphere 22.9
2848 Male, age 76, right hemisphere 21.6
Subiculum
nTPM: 23.0
2619 Male, age 74, both hemispheres 29.8
2729 Female, age 91, right hemisphere 26.0
2438 Female, age 94, left hemisphere 22.5
1977 Female, age 85, both hemispheres 21.5
1901 Male, age 80, both hemispheres 19.6
2042 Male, age 76, both hemispheres 18.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 17.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 17.0
Samples: 197

Max nTPM: 47.9
Min nTPM: 3.1
Std nTPM: 8.3
Median nTPM: 15.4
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 47.9
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 46.9
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 43.0
GTEX-11ZVC-0011-R1b-SM-5BC6M 50-59 years, female 41.4
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 40.3
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 40.0
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 39.2
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 38.6
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 35.9
GTEX-14PJO-0011-R1b-SM-6AJAK 60-69 years, male 35.2
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 32.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 30.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 30.9
FF:10153-102I9 76 years, female 47.1
FF:10169-103B7 60 years, female 14.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 1.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 1.2
Samples: 4

Max nTPM: 1.3
Min nTPM: 1.1
Sample A Female 1.1
Sample B Female 1.3
Sample C Male 1.3
Sample D Male 1.1
Entorhinal cortex
nTPM: 0.9
Samples: 4

Max nTPM: 1.0
Min nTPM: 0.8
Sample A Female 1.0
Sample B Female 0.9
Sample C Male 1.0
Sample D Male 0.8
Subiculum
nTPM: 1.1
Samples: 4

Max nTPM: 1.5
Min nTPM: 0.9
Sample A Female 0.9
Sample B Female 1.0
Sample C Male 0.9
Sample D Male 1.5
Ventral hippocampus
nTPM: 1.3
Samples: 4

Max nTPM: 1.4
Min nTPM: 1.1
Sample A Female 1.4
Sample B Female 1.3
Sample C Male 1.3
Sample D Male 1.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 2.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 2.4
Samples: 4

Max nTPM: 3.3
Min nTPM: 1.9
Sample A Male 1.9
Sample B Male 1.9
Sample C Female 2.3
Sample D Female 3.3
Hippocampal formation
nTPM: 1.6
Samples: 4

Max nTPM: 1.9
Min nTPM: 1.4
Sample A Male 1.9
Sample B Male 1.4
Sample C Female 1.6
Sample D Female 1.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.8
69407684 Antisense, RP_050414_02_B07, Mouse strain C57BL/6J (56 days, male) 0.8

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The Human Protein Atlas

The Human Protein Atlas project is funded
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