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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:51.0 nTPM
HPA:51.0 nTPM
GTEx:68.6 nTPM
FANTOM5:32.8 Scaled Tags Per Million
Pig:49.6 nTPM
Mouse:103.0 nTPM
Allen mouse:2.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA058363Antibody HPA059577
Glial cells Not detectedNot detected
Neuronal cells LowMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 51.0
Sample id Sample description nTPM
Hippocampus
nTPM: 42.5
2148 Female, age 91, left hemisphere 52.7
2529 Female, age 94, left hemisphere 46.2
1898 Male, age 80, left hemisphere 45.3
2621 Female, age 67, right hemisphere 43.9
1911 Female, age 85, right hemisphere 35.4
1855 Male, age 76, left hemisphere 31.8
Dentate gyrus
nTPM: 43.5
2531 Female, age 67, both hemispheres 66.1
1927 Female, age 91, both hemispheres 59.2
2528 Male, age 74, both hemispheres 41.3
2530 Female, age 94, left hemisphere 35.4
2010 Male, age 76, both hemispheres 30.8
2246 Female, age 85, both hemispheres 28.4
Entorhinal gyrus
nTPM: 39.6
2764 Male, age 80, right hemisphere 52.7
2613 Female, age 94, left hemisphere 47.4
1938 Female, age 85, left hemisphere 42.9
1787 Male, age 76, left hemisphere 32.8
2686 Male, age 75, right hemisphere 31.4
2117 Female, age 91, right hemisphere 30.6
Hippocampus, CA1
nTPM: 49.3
2749 Male, age 80, left hemisphere 82.6
2527 Male, age 74, both hemispheres 45.9
2082 Female, age 91, right hemisphere 41.2
1873 Female, age 85, both hemispheres 38.9
2045 Male, age 76, both hemispheres 37.8
Hippocampus, CA2
nTPM: 40.7
1963 Male, age 80, left hemisphere 70.7
2113 Female, age 91, right hemisphere 44.6
2437 Female, age 94, left hemisphere 36.8
1892 Male, age 76, both hemispheres 35.1
2249 Male, age 74, both hemispheres 28.4
1940 Female, age 85, left hemisphere 28.3
Hippocampus, CA3
nTPM: 51.0
2137 Male, age 80, left hemisphere 88.9
2620 Female, age 94, left hemisphere 67.1
2861 Female, age 67, both hemispheres 61.8
1867 Male, age 76, both hemispheres 38.3
1891 Female, age 85, both hemispheres 27.0
2436 Male, age 74, both hemispheres 22.6
Parahippocampal cortex
nTPM: 38.9
2245 Female, age 91, both hemispheres 57.5
2018 Male, age 76, both hemispheres 42.6
1933 Female, age 85, both hemispheres 42.3
1990 Female, age 91, right hemisphere 38.5
1850 Male, age 80, both hemispheres 37.8
2250 Female, age 67, right hemisphere 37.8
2622 Female, age 67, right hemisphere 37.1
2692 Male, age 74, both hemispheres 35.1
2693 Female, age 94, both hemispheres 33.9
2532 Female, age 72, left hemisphere 26.8
Perirhinal gyrus
nTPM: 43.5
1847 Female, age 91, left hemisphere 64.0
2521 Female, age 94, right hemisphere 43.0
1794 Male, age 80, right hemisphere 42.0
1841 Female, age 85, right hemisphere 34.2
2848 Male, age 76, right hemisphere 34.2
Subiculum
nTPM: 34.5
2729 Female, age 91, right hemisphere 45.0
1901 Male, age 80, both hemispheres 40.5
1977 Female, age 85, both hemispheres 35.9
2438 Female, age 94, left hemisphere 33.0
2619 Male, age 74, both hemispheres 30.3
2042 Male, age 76, both hemispheres 22.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 68.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 68.6
Samples: 197

Max nTPM: 179.7
Min nTPM: 17.6
Std nTPM: 33.8
Median nTPM: 63.3
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 179.7
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 168.3
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 162.6
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 152.9
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 146.8
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 143.9
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 142.3
GTEX-1B8L1-0011-R1a-SM-7P8SS 60-69 years, male 141.4
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 139.3
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 138.1
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 136.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 32.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 32.8
FF:10153-102I9 76 years, female 36.4
FF:10169-103B7 60 years, female 29.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 49.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 39.5
Samples: 4

Max nTPM: 43.0
Min nTPM: 35.1
Sample A Female 43.0
Sample B Female 41.0
Sample C Male 38.9
Sample D Male 35.1
Entorhinal cortex
nTPM: 49.6
Samples: 4

Max nTPM: 51.6
Min nTPM: 48.5
Sample A Female 48.5
Sample B Female 51.6
Sample C Male 49.8
Sample D Male 48.6
Subiculum
nTPM: 41.1
Samples: 4

Max nTPM: 52.7
Min nTPM: 34.2
Sample A Female 52.7
Sample B Female 37.6
Sample C Male 39.8
Sample D Male 34.2
Ventral hippocampus
nTPM: 39.6
Samples: 4

Max nTPM: 47.7
Min nTPM: 33.7
Sample A Female 34.1
Sample B Female 33.7
Sample C Male 47.7
Sample D Male 42.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 103.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 103.0
Samples: 4

Max nTPM: 110.1
Min nTPM: 93.7
Sample A Male 101.8
Sample B Male 106.3
Sample C Female 93.7
Sample D Female 110.1
Hippocampal formation
nTPM: 79.1
Samples: 4

Max nTPM: 86.8
Min nTPM: 73.3
Sample A Male 86.8
Sample B Male 81.1
Sample C Female 73.3
Sample D Female 75.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.9
72004450 Antisense, RP_050915_02_H05, Mouse strain C57BL/6J (56 days, male) 2.9

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The Human Protein Atlas

The Human Protein Atlas project is funded
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