ABOUTMENU
HELP
NEWS
RAB8B
HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:12.7 nTPM
HPA:12.7 nTPM
GTEx:10.5 nTPM
FANTOM5:100.9 Scaled Tags Per Million
Pig:53.8 nTPM
Mouse:29.1 nTPM
Allen mouse:1.4 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 12.7
Sample id Sample description nTPM
Hippocampus
nTPM: 10.8
1855 Male, age 76, left hemisphere 14.6
1898 Male, age 80, left hemisphere 14.1
1911 Female, age 85, right hemisphere 11.0
2621 Female, age 67, right hemisphere 8.8
2148 Female, age 91, left hemisphere 8.4
2529 Female, age 94, left hemisphere 8.0
Dentate gyrus
nTPM: 10.5
2010 Male, age 76, both hemispheres 13.7
1927 Female, age 91, both hemispheres 13.2
2246 Female, age 85, both hemispheres 11.7
2528 Male, age 74, both hemispheres 9.5
2530 Female, age 94, left hemisphere 8.0
2531 Female, age 67, both hemispheres 6.8
Entorhinal gyrus
nTPM: 10.2
1938 Female, age 85, left hemisphere 14.3
1787 Male, age 76, left hemisphere 10.8
2613 Female, age 94, left hemisphere 10.1
2764 Male, age 80, right hemisphere 9.6
2117 Female, age 91, right hemisphere 9.1
2686 Male, age 75, right hemisphere 7.3
Hippocampus, CA1
nTPM: 12.7
2749 Male, age 80, left hemisphere 19.2
2045 Male, age 76, both hemispheres 13.8
1873 Female, age 85, both hemispheres 13.2
2527 Male, age 74, both hemispheres 10.0
2082 Female, age 91, right hemisphere 7.7
Hippocampus, CA2
nTPM: 10.9
1892 Male, age 76, both hemispheres 17.8
1963 Male, age 80, left hemisphere 12.8
2249 Male, age 74, both hemispheres 10.4
2113 Female, age 91, right hemisphere 9.0
1940 Female, age 85, left hemisphere 8.2
2437 Female, age 94, left hemisphere 7.5
Hippocampus, CA3
nTPM: 11.8
2137 Male, age 80, left hemisphere 17.8
1867 Male, age 76, both hemispheres 16.3
2436 Male, age 74, both hemispheres 11.6
1891 Female, age 85, both hemispheres 11.5
2861 Female, age 67, both hemispheres 7.1
2620 Female, age 94, left hemisphere 6.5
Parahippocampal cortex
nTPM: 9.7
1850 Male, age 80, both hemispheres 12.2
2250 Female, age 67, right hemisphere 11.0
1933 Female, age 85, both hemispheres 10.8
1990 Female, age 91, right hemisphere 10.5
2018 Male, age 76, both hemispheres 10.1
2245 Female, age 91, both hemispheres 10.0
2693 Female, age 94, both hemispheres 9.6
2692 Male, age 74, both hemispheres 8.6
2532 Female, age 72, left hemisphere 8.3
2622 Female, age 67, right hemisphere 5.9
Perirhinal gyrus
nTPM: 11.3
1847 Female, age 91, left hemisphere 14.8
2521 Female, age 94, right hemisphere 11.2
2848 Male, age 76, right hemisphere 11.0
1794 Male, age 80, right hemisphere 10.4
1841 Female, age 85, right hemisphere 8.9
Subiculum
nTPM: 10.2
1901 Male, age 80, both hemispheres 13.2
2042 Male, age 76, both hemispheres 12.9
1977 Female, age 85, both hemispheres 11.0
2729 Female, age 91, right hemisphere 9.2
2438 Female, age 94, left hemisphere 8.2
2619 Male, age 74, both hemispheres 6.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 10.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 10.5
Samples: 197

Max nTPM: 19.3
Min nTPM: 6.5
Std nTPM: 2.2
Median nTPM: 10.1
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 19.3
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 18.8
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 17.3
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 17.1
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 15.8
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 15.8
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 15.2
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 14.7
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 14.6
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 14.5
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 14.4
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 100.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 100.9
FF:10169-103B7 60 years, female 130.7
FF:10153-102I9 76 years, female 71.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 53.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 53.8
Samples: 4

Max nTPM: 64.5
Min nTPM: 43.1
Sample A Female 64.5
Sample B Female 63.8
Sample C Male 43.1
Sample D Male 43.9
Entorhinal cortex
nTPM: 30.4
Samples: 4

Max nTPM: 33.9
Min nTPM: 26.5
Sample A Female 33.9
Sample B Female 26.5
Sample C Male 32.2
Sample D Male 28.9
Subiculum
nTPM: 39.7
Samples: 4

Max nTPM: 44.1
Min nTPM: 37.5
Sample A Female 44.1
Sample B Female 38.0
Sample C Male 39.0
Sample D Male 37.5
Ventral hippocampus
nTPM: 47.2
Samples: 4

Max nTPM: 77.5
Min nTPM: 30.9
Sample A Female 40.9
Sample B Female 39.3
Sample C Male 30.9
Sample D Male 77.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 29.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 22.4
Samples: 4

Max nTPM: 25.1
Min nTPM: 20.4
Sample A Male 21.6
Sample B Male 20.4
Sample C Female 25.1
Sample D Female 22.5
Hippocampal formation
nTPM: 29.1
Samples: 4

Max nTPM: 30.5
Min nTPM: 27.1
Sample A Male 28.6
Sample B Male 30.5
Sample C Female 30.3
Sample D Female 27.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.4
68844618 Antisense, RP_050222_02_A11, Mouse strain C57BL/6J (56 days, male) 1.4

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.