ABOUTMENU
HELP
NEWS
BRD7
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
RNA expressioni
Consensus:49.5 nTPM
HPA:49.5 nTPM
GTEx:46.4 nTPM
FANTOM5:90.8 Scaled Tags Per Million
Pig:28.2 nTPM
Mouse:21.3 nTPM
Allen mouse:1.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody CAB046458
Glial cells Low
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 49.5
Sample id Sample description nTPM
Hippocampus
nTPM: 48.3
2529 Female, age 94, left hemisphere 49.9
1911 Female, age 85, right hemisphere 48.8
2621 Female, age 67, right hemisphere 48.6
1898 Male, age 80, left hemisphere 48.1
1855 Male, age 76, left hemisphere 47.6
2148 Female, age 91, left hemisphere 46.9
Dentate gyrus
nTPM: 46.7
2530 Female, age 94, left hemisphere 48.6
2010 Male, age 76, both hemispheres 47.8
2246 Female, age 85, both hemispheres 47.7
2531 Female, age 67, both hemispheres 46.1
2528 Male, age 74, both hemispheres 45.7
1927 Female, age 91, both hemispheres 44.4
Entorhinal gyrus
nTPM: 47.9
2117 Female, age 91, right hemisphere 50.6
2686 Male, age 75, right hemisphere 49.9
1938 Female, age 85, left hemisphere 48.2
2764 Male, age 80, right hemisphere 47.2
1787 Male, age 76, left hemisphere 46.7
2613 Female, age 94, left hemisphere 44.6
Hippocampus, CA1
nTPM: 47.0
2527 Male, age 74, both hemispheres 48.2
1873 Female, age 85, both hemispheres 48.0
2082 Female, age 91, right hemisphere 47.1
2045 Male, age 76, both hemispheres 46.1
2749 Male, age 80, left hemisphere 45.8
Hippocampus, CA2
nTPM: 47.3
1940 Female, age 85, left hemisphere 48.4
2437 Female, age 94, left hemisphere 47.9
2113 Female, age 91, right hemisphere 47.5
1963 Male, age 80, left hemisphere 47.4
1892 Male, age 76, both hemispheres 46.3
2249 Male, age 74, both hemispheres 46.1
Hippocampus, CA3
nTPM: 46.1
1891 Female, age 85, both hemispheres 49.5
1867 Male, age 76, both hemispheres 46.8
2436 Male, age 74, both hemispheres 46.0
2137 Male, age 80, left hemisphere 45.4
2861 Female, age 67, both hemispheres 45.1
2620 Female, age 94, left hemisphere 44.0
Parahippocampal cortex
nTPM: 47.2
2692 Male, age 74, both hemispheres 48.8
2245 Female, age 91, both hemispheres 48.1
1850 Male, age 80, both hemispheres 47.8
1933 Female, age 85, both hemispheres 47.4
2532 Female, age 72, left hemisphere 47.4
2018 Male, age 76, both hemispheres 47.3
1990 Female, age 91, right hemisphere 47.0
2250 Female, age 67, right hemisphere 46.5
2622 Female, age 67, right hemisphere 46.1
2693 Female, age 94, both hemispheres 45.2
Perirhinal gyrus
nTPM: 47.2
1794 Male, age 80, right hemisphere 48.8
2848 Male, age 76, right hemisphere 47.4
1847 Female, age 91, left hemisphere 47.0
1841 Female, age 85, right hemisphere 46.6
2521 Female, age 94, right hemisphere 46.2
Subiculum
nTPM: 49.5
2438 Female, age 94, left hemisphere 53.6
1901 Male, age 80, both hemispheres 50.4
2042 Male, age 76, both hemispheres 49.5
2619 Male, age 74, both hemispheres 48.8
1977 Female, age 85, both hemispheres 47.5
2729 Female, age 91, right hemisphere 47.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 46.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 46.4
Samples: 197

Max nTPM: 95.3
Min nTPM: 23.5
Std nTPM: 11.9
Median nTPM: 44.0
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 95.3
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 89.9
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 86.8
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 79.2
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 79.1
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 72.3
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 66.7
GTEX-1F75W-0011-R1a-SM-ARU81 60-69 years, male 66.3
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 65.7
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 64.7
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 64.3
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 90.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 90.8
FF:10153-102I9 76 years, female 96.9
FF:10169-103B7 60 years, female 84.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 28.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 28.2
Samples: 4

Max nTPM: 33.7
Min nTPM: 23.2
Sample A Female 33.7
Sample B Female 26.4
Sample C Male 29.5
Sample D Male 23.2
Entorhinal cortex
nTPM: 23.9
Samples: 4

Max nTPM: 25.4
Min nTPM: 22.5
Sample A Female 25.4
Sample B Female 24.3
Sample C Male 23.3
Sample D Male 22.5
Subiculum
nTPM: 27.2
Samples: 4

Max nTPM: 33.4
Min nTPM: 24.1
Sample A Female 33.4
Sample B Female 27.0
Sample C Male 24.1
Sample D Male 24.1
Ventral hippocampus
nTPM: 25.9
Samples: 4

Max nTPM: 27.0
Min nTPM: 24.7
Sample A Female 26.0
Sample B Female 24.7
Sample C Male 26.0
Sample D Male 27.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 21.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 19.0
Samples: 4

Max nTPM: 19.5
Min nTPM: 18.4
Sample A Male 18.4
Sample B Male 19.5
Sample C Female 19.2
Sample D Female 18.9
Hippocampal formation
nTPM: 21.4
Samples: 4

Max nTPM: 23.0
Min nTPM: 20.5
Sample A Male 21.2
Sample B Male 20.5
Sample C Female 23.0
Sample D Female 20.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.3
69529412 Antisense, RP_050421_04_C02, Mouse strain C57BL/6J (56 days, male) 1.3

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.