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GABRB3
HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:28.0 nTPM
HPA:28.0 nTPM
GTEx:20.6 nTPM
FANTOM5:53.0 Scaled Tags Per Million
Pig:75.9 nTPM
Mouse:132.8 nTPM
Allen mouse:13.8 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 28.0
Sample id Sample description nTPM
Hippocampus
nTPM: 13.8
1898 Male, age 80, left hemisphere 22.4
2621 Female, age 67, right hemisphere 17.3
1855 Male, age 76, left hemisphere 17.2
2148 Female, age 91, left hemisphere 17.0
1911 Female, age 85, right hemisphere 8.5
2529 Female, age 94, left hemisphere 0.3
Dentate gyrus
nTPM: 18.7
1927 Female, age 91, both hemispheres 36.5
2531 Female, age 67, both hemispheres 25.7
2010 Male, age 76, both hemispheres 20.4
2246 Female, age 85, both hemispheres 14.5
2528 Male, age 74, both hemispheres 9.4
2530 Female, age 94, left hemisphere 5.7
Entorhinal gyrus
nTPM: 14.0
2613 Female, age 94, left hemisphere 25.7
1938 Female, age 85, left hemisphere 20.6
1787 Male, age 76, left hemisphere 17.1
2764 Male, age 80, right hemisphere 13.7
2686 Male, age 75, right hemisphere 5.1
2117 Female, age 91, right hemisphere 1.9
Hippocampus, CA1
nTPM: 24.6
2749 Male, age 80, left hemisphere 51.9
2045 Male, age 76, both hemispheres 30.0
1873 Female, age 85, both hemispheres 21.2
2527 Male, age 74, both hemispheres 13.2
2082 Female, age 91, right hemisphere 6.9
Hippocampus, CA2
nTPM: 12.2
1892 Male, age 76, both hemispheres 25.5
1963 Male, age 80, left hemisphere 25.3
1940 Female, age 85, left hemisphere 6.9
2249 Male, age 74, both hemispheres 5.6
2437 Female, age 94, left hemisphere 5.3
2113 Female, age 91, right hemisphere 4.4
Hippocampus, CA3
nTPM: 21.7
2137 Male, age 80, left hemisphere 42.7
2620 Female, age 94, left hemisphere 33.7
1867 Male, age 76, both hemispheres 19.3
2861 Female, age 67, both hemispheres 18.6
1891 Female, age 85, both hemispheres 9.2
2436 Male, age 74, both hemispheres 7.0
Parahippocampal cortex
nTPM: 14.4
1850 Male, age 80, both hemispheres 23.5
2693 Female, age 94, both hemispheres 20.4
2250 Female, age 67, right hemisphere 19.4
2245 Female, age 91, both hemispheres 16.7
1933 Female, age 85, both hemispheres 16.0
1990 Female, age 91, right hemisphere 15.8
2018 Male, age 76, both hemispheres 11.0
2532 Female, age 72, left hemisphere 8.9
2622 Female, age 67, right hemisphere 7.7
2692 Male, age 74, both hemispheres 4.4
Perirhinal gyrus
nTPM: 28.0
1847 Female, age 91, left hemisphere 40.7
1794 Male, age 80, right hemisphere 31.0
2521 Female, age 94, right hemisphere 30.1
1841 Female, age 85, right hemisphere 21.7
2848 Male, age 76, right hemisphere 16.7
Subiculum
nTPM: 8.9
1901 Male, age 80, both hemispheres 15.7
1977 Female, age 85, both hemispheres 14.6
2729 Female, age 91, right hemisphere 7.8
2042 Male, age 76, both hemispheres 6.5
2438 Female, age 94, left hemisphere 4.9
2619 Male, age 74, both hemispheres 4.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 20.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 20.6
Samples: 197

Max nTPM: 65.1
Min nTPM: 0.7
Std nTPM: 13.5
Median nTPM: 18.5
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 65.1
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 55.6
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 54.9
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 49.5
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 49.1
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 49.1
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 49.0
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 48.3
GTEX-11GSP-0011-R1a-SM-9QEJ3 60-69 years, female 44.8
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 44.7
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 44.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 53.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 53.0
FF:10169-103B7 60 years, female 60.6
FF:10153-102I9 76 years, female 45.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 75.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 75.9
Samples: 4

Max nTPM: 91.4
Min nTPM: 53.6
Sample A Female 85.3
Sample B Female 91.4
Sample C Male 53.6
Sample D Male 73.2
Entorhinal cortex
nTPM: 62.0
Samples: 4

Max nTPM: 67.7
Min nTPM: 55.3
Sample A Female 67.7
Sample B Female 55.3
Sample C Male 67.2
Sample D Male 57.9
Subiculum
nTPM: 67.3
Samples: 4

Max nTPM: 89.6
Min nTPM: 55.9
Sample A Female 89.6
Sample B Female 63.3
Sample C Male 60.4
Sample D Male 55.9
Ventral hippocampus
nTPM: 67.1
Samples: 4

Max nTPM: 83.1
Min nTPM: 53.0
Sample A Female 64.1
Sample B Female 53.0
Sample C Male 68.3
Sample D Male 83.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 132.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 107.5
Samples: 4

Max nTPM: 129.7
Min nTPM: 95.7
Sample A Male 97.0
Sample B Male 95.7
Sample C Female 107.4
Sample D Female 129.7
Hippocampal formation
nTPM: 132.8
Samples: 4

Max nTPM: 156.6
Min nTPM: 106.6
Sample A Male 120.5
Sample B Male 147.5
Sample C Female 156.6
Sample D Female 106.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 13.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 13.8
69256872 Antisense, RP_050331_02_C03, Mouse strain C57BL/6J (56 days, male) 15.7
75551468 Antisense, RP_060523_02_B05, Mouse strain C57BL/6J (56 days, male) 11.9

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The Human Protein Atlas

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