We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
For selected proteins extended tissue profiling is performed in addition to standard tissue microarrays. The section below contains results from the extended profiling.
, antibody HPA047627
Pigment epithelial cells
Not detected
Photoreceptor cells
Low
Limiting membrane
Not detected
Outer plexiform layer
High
Inner nuclear layer
Not detected
Inner plexiform layer
High
Ganglion cells
Not detected
Nerve fiber layer
Not detected
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM: 494.5
Min nTPM: 144.1
Std nTPM: 63.2
Median nTPM:
415_1
77 years, female
494.5
490_1
67 years, female
456.5
246_1
77 years, male
453.5
414_1
84 years, female
447.2
413_1
59 years, female
447.0
466_1
57 years, female
432.9
35_1
74 years, female
426.6
217_1
76 years, male
423.6
162_1
79 years, female
413.1
126_1
63 years, male
403.5
324_1
76 years, male
399.2
149_1
88 years, male
393.7
43_1
64 years, female
387.4
229_1
69 years, female
387.0
468_1
89 years, male
379.5
153_1
70 years, female
377.6
375_1
74 years, female
376.5
237_1
82 years, male
368.5
315_1
62 years, female
367.4
377_1
82 years, female
363.3
251_1
78 years, male
361.8
6_1
73 years, female
360.3
81_1
67 years, male
359.7
447_1
81 years, male
357.8
32_1
67 years, male
356.7
265_1
87 years, male
352.8
319_1
81 years, male
352.0
389_1
86 years, female
349.6
518_1
75 years, female
347.4
316_1
62 years, male
347.3
142_1
61 years, female
346.2
405_1
91 years, male
341.7
396_1
62 years, male
336.4
254_1
77 years, female
335.4
17_1
71 years, male
335.3
139_1
64 years, female
334.8
425_1
59 years, female
334.6
526_1
61 years, male
332.6
266_1
85 years, male
332.4
491_1
89 years, female
330.2
386_1
76 years, male
329.5
189_1
76 years, male
329.3
115_1
83 years, male
326.2
9_1
66 years, female
325.4
117_1
61 years, male
325.4
322_1
76 years, male
325.1
18_1
88 years, male
320.8
145_1
84 years, male
319.0
172_1
72 years, female
318.0
335_1
73 years, female
315.9
503_1
68 years, male
314.4
379_1
60 years, male
313.9
384_1
83 years, male
312.0
89_1
63 years, male
308.4
480_1
63 years, male
307.4
318_1
68 years, male
306.8
352_1
62 years, male
305.0
376_1
75 years, female
304.2
501_1
88 years, male
304.0
311_1
78 years, male
303.5
137_1
83 years, male
301.7
404_1
82 years, female
301.7
313_1
79 years, female
300.3
499_1
55 years, female
297.7
347_1
72 years, male
297.5
243_1
75 years, male
296.1
495_1
57 years, female
295.7
307_1
66 years, female
295.5
321_1
62 years, female
292.1
292_1
71 years, male
288.5
2_1
77 years, female
285.8
177_1
74 years, male
284.7
406_1
79 years, male
279.5
348_1
84 years, male
278.1
218_1
71 years, female
274.5
119_1
70 years, female
272.6
517_1
88 years, male
270.9
288_1
66 years, female
270.1
355_1
70 years, female
268.0
354_1
81 years, female
266.9
99_1
64 years, male
266.5
394_1
75 years, female
265.4
4_1
88 years, female
265.0
293_1
68 years, female
264.6
350_1
84 years, female
262.5
286_1
68 years, female
261.6
42_1
85 years, male
261.4
120_1
70 years, female
257.2
320_1
89 years, female
254.2
291_1
76 years, male
253.1
173_1
67 years, male
250.7
314_1
67 years, male
250.0
109_1
81 years, female
244.6
351_1
91 years, male
240.0
317_1
60 years, male
234.5
264_1
73 years, female
233.6
356_1
87 years, female
233.4
349_1
83 years, male
231.8
163_1
78 years, male
228.2
353_1
82 years, female
223.4
41_1
94 years, female
220.9
295_1
61 years, female
195.1
506_1
65 years, male
194.1
452_1
88 years, female
190.2
308_1
70 years, female
144.1
Show allShow less
RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.