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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: High
RNA expressioni
Consensus:11.9 nTPM
HPA:11.9 nTPM
GTEx:10.6 nTPM
FANTOM5:24.4 Scaled Tags Per Million
Mouse:24.0 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA042529Antibody HPA042616
Glial cells Not detectedHigh
Neuronal cells HighHigh





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 11.9
Sample id Sample description nTPM
Hippocampus
nTPM: 9.8
1898 Male, age 80, left hemisphere 10.2
2529 Female, age 94, left hemisphere 10.1
1911 Female, age 85, right hemisphere 10.0
2148 Female, age 91, left hemisphere 9.9
2621 Female, age 67, right hemisphere 9.9
1855 Male, age 76, left hemisphere 8.5
Dentate gyrus
nTPM: 9.9
2531 Female, age 67, both hemispheres 12.2
2530 Female, age 94, left hemisphere 10.3
2528 Male, age 74, both hemispheres 9.5
1927 Female, age 91, both hemispheres 9.4
2246 Female, age 85, both hemispheres 9.0
2010 Male, age 76, both hemispheres 8.9
Entorhinal gyrus
nTPM: 11.9
2764 Male, age 80, right hemisphere 13.4
1787 Male, age 76, left hemisphere 12.5
1938 Female, age 85, left hemisphere 12.5
2613 Female, age 94, left hemisphere 12.1
2117 Female, age 91, right hemisphere 11.7
2686 Male, age 75, right hemisphere 9.4
Hippocampus, CA1
nTPM: 9.7
2527 Male, age 74, both hemispheres 11.5
2749 Male, age 80, left hemisphere 10.5
1873 Female, age 85, both hemispheres 10.1
2045 Male, age 76, both hemispheres 8.9
2082 Female, age 91, right hemisphere 7.6
Hippocampus, CA2
nTPM: 9.9
1963 Male, age 80, left hemisphere 11.6
2249 Male, age 74, both hemispheres 11.0
1940 Female, age 85, left hemisphere 10.0
2437 Female, age 94, left hemisphere 9.6
1892 Male, age 76, both hemispheres 8.5
2113 Female, age 91, right hemisphere 8.5
Hippocampus, CA3
nTPM: 9.5
2861 Female, age 67, both hemispheres 11.1
2620 Female, age 94, left hemisphere 10.3
1867 Male, age 76, both hemispheres 9.5
1891 Female, age 85, both hemispheres 9.5
2137 Male, age 80, left hemisphere 9.2
2436 Male, age 74, both hemispheres 7.7
Parahippocampal cortex
nTPM: 10.6
1933 Female, age 85, both hemispheres 11.5
1990 Female, age 91, right hemisphere 11.3
2622 Female, age 67, right hemisphere 11.1
2250 Female, age 67, right hemisphere 11.0
2692 Male, age 74, both hemispheres 10.8
2018 Male, age 76, both hemispheres 10.7
2532 Female, age 72, left hemisphere 10.7
2245 Female, age 91, both hemispheres 10.5
1850 Male, age 80, both hemispheres 9.2
2693 Female, age 94, both hemispheres 8.9
Perirhinal gyrus
nTPM: 11.3
1794 Male, age 80, right hemisphere 12.2
1847 Female, age 91, left hemisphere 11.5
2848 Male, age 76, right hemisphere 11.3
2521 Female, age 94, right hemisphere 10.8
1841 Female, age 85, right hemisphere 10.7
Subiculum
nTPM: 10.1
1977 Female, age 85, both hemispheres 12.9
2619 Male, age 74, both hemispheres 10.9
2729 Female, age 91, right hemisphere 10.3
2438 Female, age 94, left hemisphere 9.2
1901 Male, age 80, both hemispheres 9.1
2042 Male, age 76, both hemispheres 8.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 10.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 10.6
Samples: 197

Max nTPM: 29.9
Min nTPM: 2.0
Std nTPM: 3.8
Median nTPM: 10.2
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 29.9
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 26.1
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 24.7
GTEX-1HGF4-0011-R1a-SM-CJI3S 60-69 years, male 21.2
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 20.3
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 19.2
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 18.5
GTEX-1C64N-0011-R1b-SM-7P8Q7 50-59 years, male 17.9
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 17.2
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 17.0
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 16.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 24.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 24.4
FF:10153-102I9 76 years, female 26.8
FF:10169-103B7 60 years, female 21.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 24.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 19.5
Samples: 4

Max nTPM: 22.2
Min nTPM: 17.7
Sample A Male 19.6
Sample B Male 22.2
Sample C Female 18.6
Sample D Female 17.7
Hippocampal formation
nTPM: 24.0
Samples: 4

Max nTPM: 26.0
Min nTPM: 20.2
Sample A Male 24.9
Sample B Male 20.2
Sample C Female 24.9
Sample D Female 26.0

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The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.