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COG1
AMYGDALA - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:37.1 nTPM
HPA:37.1 nTPM
GTEx:34.5 nTPM
FANTOM5:42.2 Scaled Tags Per Million
Pig:17.7 nTPM
Mouse:26.0 nTPM
Allen mouse:10.9 Expression energy

AMYGDALA - HPA Brain RNA-seq
Max nTPM 37.1
Sample id Sample description nTPM
Amygdala
nTPM: 27.5
1987 Female, age 91, left hemisphere 30.8
2517 Female, age 94, left hemisphere 30.3
2514 Male, age 75, right hemisphere 27.6
2814 Male, age 76, right hemisphere 26.4
2695 Female, age 67, right hemisphere 22.5
Basal amygdala
nTPM: 34.3
2243 Female, age 91, right hemisphere 43.2
2110 Male, age 80, left hemisphere 37.2
2685 Female, age 94, left hemisphere 36.8
1955 Male, age 76, both hemispheres 30.4
2827 Female, age 67, right hemisphere 29.2
2609 Male, age 75, right hemisphere 29.1
Central amygdala
nTPM: 29.8
2239 Male, age 80, left hemisphere 35.8
2701 Female, age 91, right hemisphere 29.8
2826 Female, age 94, left hemisphere 28.7
2515 Male, age 75, right hemisphere 27.6
1905 Male, age 76, both hemispheres 27.0
Corticomedial amygdala
nTPM: 35.1
2242 Female, age 91, right hemisphere 41.6
2829 Male, age 80, left hemisphere 38.7
2535 Female, age 67, right hemisphere 36.7
2429 Female, age 94, left hemisphere 34.9
2240 Male, age 76, both hemispheres 29.5
2428 Male, age 75, right hemisphere 29.3
Lateral amygdala
nTPM: 30.0
2255 Female, age 91, right hemisphere 33.2
2534 Female, age 94, left hemisphere 33.2
2256 Male, age 80, left hemisphere 32.9
1883 Male, age 76, both hemispheres 28.7
2516 Male, age 75, right hemisphere 27.3
2830 Female, age 67, right hemisphere 24.8
Stria terminalis, bed nucleus
nTPM: 37.1
2486 Female, age 94, both hemispheres 40.9
1974 Female, age 91, both hemispheres 39.7
2201 Male, age 74, unknown 30.8

AMYGDALA - GTEx RNA-seqi
Average nTPM 34.5
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 34.5
Samples: 152

Max nTPM: 77.0
Min nTPM: 11.1
Std nTPM: 12.5
Median nTPM: 33.1
GTEX-1HCU6-0011-R4b-SM-ARU74 60-69 years, female 77.0
GTEX-14ASI-0011-R4a-SM-69LQ4 60-69 years, male 72.5
GTEX-1E1VI-0011-R4b-SM-9QEHV 50-59 years, male 72.3
GTEX-WZTO-0011-R4A-SM-3NMC7 40-49 years, male 69.4
GTEX-1AX9I-0011-R4b-SM-7EPIB 60-69 years, male 65.9
GTEX-S7SE-0011-R4A-SM-2XCDB 50-59 years, male 59.6
GTEX-TSE9-0011-R4A-SM-3DB7H 60-69 years, female 56.2
GTEX-15SHU-0011-R4b-SM-7IGLC 40-49 years, female 54.7
GTEX-1F48J-0011-R4b-SM-9OSVX 50-59 years, female 54.1
GTEX-1JMQJ-0011-R4b-SM-EXUT8 50-59 years, male 53.7
GTEX-YFC4-0011-R4a-SM-4RGLQ 40-49 years, female 53.4
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AMYGDALA - FANTOM5 CAGEi
Max Scaled Tags Per Million 42.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 42.2
FF:10151-102I7 76 years, female 42.2

AMYGDALA - Pig RNA-seqi
Average nTPM 17.7
Pig sample Sample description nTPM
Amygdala
nTPM: 17.7
Samples: 4

Max nTPM: 19.0
Min nTPM: 15.9
Sample A Female 18.4
Sample B Female 17.6
Sample C Male 19.0
Sample D Male 15.9

AMYGDALA - Mouse RNA-seqi
Average nTPM 26.0
Mouse sample Sample description nTPM
Amygdala
nTPM: 26.0
Samples: 4

Max nTPM: 27.0
Min nTPM: 24.5
Sample A Male 25.8
Sample B Male 27.0
Sample C Female 24.5
Sample D Female 26.7

AMYGDALA - Allen Mouse ISHi
Max Expression energy 10.9
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 10.9
68844092 Antisense, RP_050217_02_H05, Mouse strain C57BL/6J (56 days, male) 10.9

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.