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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:42.0 nTPM
HPA:42.0 nTPM
GTEx:34.8 nTPM
FANTOM5:45.9 Scaled Tags Per Million
Pig:23.0 nTPM
Mouse:26.5 nTPM
Allen mouse:9.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA029224
Glial cells Medium
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 42.0
Sample id Sample description nTPM
Hippocampus
nTPM: 33.3
1898 Male, age 80, left hemisphere 35.7
2148 Female, age 91, left hemisphere 35.7
2621 Female, age 67, right hemisphere 35.0
1855 Male, age 76, left hemisphere 33.1
1911 Female, age 85, right hemisphere 31.0
2529 Female, age 94, left hemisphere 29.0
Dentate gyrus
nTPM: 33.0
2531 Female, age 67, both hemispheres 39.2
1927 Female, age 91, both hemispheres 35.4
2246 Female, age 85, both hemispheres 33.1
2528 Male, age 74, both hemispheres 32.0
2010 Male, age 76, both hemispheres 30.0
2530 Female, age 94, left hemisphere 28.0
Entorhinal gyrus
nTPM: 37.1
2613 Female, age 94, left hemisphere 43.1
2764 Male, age 80, right hemisphere 41.9
2686 Male, age 75, right hemisphere 37.0
1938 Female, age 85, left hemisphere 36.3
1787 Male, age 76, left hemisphere 34.4
2117 Female, age 91, right hemisphere 29.9
Hippocampus, CA1
nTPM: 35.8
2749 Male, age 80, left hemisphere 43.8
2082 Female, age 91, right hemisphere 35.2
2527 Male, age 74, both hemispheres 34.0
2045 Male, age 76, both hemispheres 33.7
1873 Female, age 85, both hemispheres 32.3
Hippocampus, CA2
nTPM: 33.4
2113 Female, age 91, right hemisphere 35.5
1963 Male, age 80, left hemisphere 34.6
1940 Female, age 85, left hemisphere 33.9
1892 Male, age 76, both hemispheres 32.8
2249 Male, age 74, both hemispheres 32.2
2437 Female, age 94, left hemisphere 31.6
Hippocampus, CA3
nTPM: 36.9
2137 Male, age 80, left hemisphere 44.6
2620 Female, age 94, left hemisphere 42.7
2861 Female, age 67, both hemispheres 37.7
2436 Male, age 74, both hemispheres 32.8
1867 Male, age 76, both hemispheres 31.9
1891 Female, age 85, both hemispheres 31.5
Parahippocampal cortex
nTPM: 36.0
1850 Male, age 80, both hemispheres 41.8
2622 Female, age 67, right hemisphere 41.1
2245 Female, age 91, both hemispheres 38.3
2532 Female, age 72, left hemisphere 36.8
2693 Female, age 94, both hemispheres 36.5
1933 Female, age 85, both hemispheres 36.2
1990 Female, age 91, right hemisphere 33.4
2250 Female, age 67, right hemisphere 33.4
2018 Male, age 76, both hemispheres 31.7
2692 Male, age 74, both hemispheres 30.8
Perirhinal gyrus
nTPM: 42.0
1847 Female, age 91, left hemisphere 45.9
2521 Female, age 94, right hemisphere 44.8
1794 Male, age 80, right hemisphere 44.3
1841 Female, age 85, right hemisphere 37.7
2848 Male, age 76, right hemisphere 37.3
Subiculum
nTPM: 31.7
1901 Male, age 80, both hemispheres 33.6
1977 Female, age 85, both hemispheres 33.5
2729 Female, age 91, right hemisphere 32.7
2438 Female, age 94, left hemisphere 31.8
2619 Male, age 74, both hemispheres 30.1
2042 Male, age 76, both hemispheres 28.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 34.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 34.8
Samples: 197

Max nTPM: 86.3
Min nTPM: 10.7
Std nTPM: 14.2
Median nTPM: 33.1
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 86.3
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 71.1
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 67.3
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 66.8
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 64.9
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 63.0
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 63.0
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 62.7
GTEX-1B8SF-0011-R1b-SM-7P8Q8 60-69 years, male 61.8
GTEX-11EI6-0011-R1a-SM-DO93L 60-69 years, male 61.3
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 59.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 45.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 45.9
FF:10169-103B7 60 years, female 56.5
FF:10153-102I9 76 years, female 35.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 23.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 21.9
Samples: 4

Max nTPM: 27.0
Min nTPM: 16.0
Sample A Female 22.3
Sample B Female 27.0
Sample C Male 22.2
Sample D Male 16.0
Entorhinal cortex
nTPM: 20.7
Samples: 4

Max nTPM: 25.4
Min nTPM: 16.1
Sample A Female 18.0
Sample B Female 25.4
Sample C Male 23.4
Sample D Male 16.1
Subiculum
nTPM: 19.8
Samples: 4

Max nTPM: 22.8
Min nTPM: 15.8
Sample A Female 20.2
Sample B Female 20.5
Sample C Male 22.8
Sample D Male 15.8
Ventral hippocampus
nTPM: 23.1
Samples: 4

Max nTPM: 30.7
Min nTPM: 20.1
Sample A Female 20.8
Sample B Female 20.1
Sample C Male 30.7
Sample D Male 20.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 26.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 24.3
Samples: 4

Max nTPM: 25.7
Min nTPM: 20.7
Sample A Male 20.7
Sample B Male 25.6
Sample C Female 25.0
Sample D Female 25.7
Hippocampal formation
nTPM: 26.5
Samples: 4

Max nTPM: 29.2
Min nTPM: 22.5
Sample A Male 26.8
Sample B Male 29.2
Sample C Female 27.4
Sample D Female 22.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 9.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 9.3
68844092 Antisense, RP_050217_02_H05, Mouse strain C57BL/6J (56 days, male) 9.3

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The Human Protein Atlas

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