ABOUTMENU
HELP
NEWS
PPIB
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:229.7 nTPM
HPA:229.7 nTPM
GTEx:143.3 nTPM
FANTOM5:170.2 Scaled Tags Per Million
Pig:12.7 nTPM
Mouse:231.3 nTPM
Allen mouse:16.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA012720Antibody CAB011487
Glial cells LowMedium
Neuronal cells MediumMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 229.7
Sample id Sample description nTPM
Hippocampus
nTPM: 229.7
1898 Male, age 80, left hemisphere 239.9
2529 Female, age 94, left hemisphere 231.5
2148 Female, age 91, left hemisphere 228.2
2621 Female, age 67, right hemisphere 227.1
1911 Female, age 85, right hemisphere 225.8
1855 Male, age 76, left hemisphere 225.5
Dentate gyrus
nTPM: 226.0
2530 Female, age 94, left hemisphere 230.8
2010 Male, age 76, both hemispheres 230.4
2528 Male, age 74, both hemispheres 228.1
2246 Female, age 85, both hemispheres 226.7
1927 Female, age 91, both hemispheres 223.1
2531 Female, age 67, both hemispheres 217.2
Entorhinal gyrus
nTPM: 222.7
2117 Female, age 91, right hemisphere 234.5
1938 Female, age 85, left hemisphere 231.4
1787 Male, age 76, left hemisphere 225.1
2764 Male, age 80, right hemisphere 224.3
2686 Male, age 75, right hemisphere 211.4
2613 Female, age 94, left hemisphere 209.7
Hippocampus, CA1
nTPM: 226.8
1873 Female, age 85, both hemispheres 232.6
2527 Male, age 74, both hemispheres 228.9
2749 Male, age 80, left hemisphere 225.6
2082 Female, age 91, right hemisphere 224.6
2045 Male, age 76, both hemispheres 222.4
Hippocampus, CA2
nTPM: 229.6
2249 Male, age 74, both hemispheres 244.9
1940 Female, age 85, left hemisphere 230.9
1892 Male, age 76, both hemispheres 230.0
1963 Male, age 80, left hemisphere 228.0
2113 Female, age 91, right hemisphere 223.3
2437 Female, age 94, left hemisphere 220.7
Hippocampus, CA3
nTPM: 224.8
2436 Male, age 74, both hemispheres 243.9
1891 Female, age 85, both hemispheres 229.7
1867 Male, age 76, both hemispheres 227.0
2137 Male, age 80, left hemisphere 219.4
2620 Female, age 94, left hemisphere 214.4
2861 Female, age 67, both hemispheres 214.4
Parahippocampal cortex
nTPM: 222.0
2250 Female, age 67, right hemisphere 230.2
1933 Female, age 85, both hemispheres 229.8
1990 Female, age 91, right hemisphere 225.9
2018 Male, age 76, both hemispheres 225.0
2245 Female, age 91, both hemispheres 223.6
1850 Male, age 80, both hemispheres 222.2
2532 Female, age 72, left hemisphere 221.7
2692 Male, age 74, both hemispheres 219.5
2693 Female, age 94, both hemispheres 212.4
2622 Female, age 67, right hemisphere 209.3
Perirhinal gyrus
nTPM: 223.1
1847 Female, age 91, left hemisphere 227.2
1841 Female, age 85, right hemisphere 225.6
2521 Female, age 94, right hemisphere 223.2
1794 Male, age 80, right hemisphere 222.2
2848 Male, age 76, right hemisphere 217.3
Subiculum
nTPM: 227.7
2042 Male, age 76, both hemispheres 231.8
1977 Female, age 85, both hemispheres 230.9
1901 Male, age 80, both hemispheres 230.5
2619 Male, age 74, both hemispheres 226.5
2438 Female, age 94, left hemisphere 223.8
2729 Female, age 91, right hemisphere 222.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 143.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 143.3
Samples: 197

Max nTPM: 304.6
Min nTPM: 76.2
Std nTPM: 33.4
Median nTPM: 140.1
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 304.6
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 287.6
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 245.7
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 238.3
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 232.1
GTEX-1GZHY-0011-R1a-SM-CE6RR 50-59 years, female 226.2
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 216.7
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 208.8
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 203.0
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 199.6
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 199.4
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 170.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 170.2
FF:10153-102I9 76 years, female 204.5
FF:10169-103B7 60 years, female 136.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 12.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 12.7
Samples: 4

Max nTPM: 15.8
Min nTPM: 10.2
Sample A Female 15.8
Sample B Female 11.7
Sample C Male 13.1
Sample D Male 10.2
Entorhinal cortex
nTPM: 10.3
Samples: 4

Max nTPM: 10.8
Min nTPM: 9.4
Sample A Female 10.8
Sample B Female 10.8
Sample C Male 10.3
Sample D Male 9.4
Subiculum
nTPM: 10.9
Samples: 4

Max nTPM: 12.6
Min nTPM: 10.0
Sample A Female 12.6
Sample B Female 10.8
Sample C Male 10.1
Sample D Male 10.0
Ventral hippocampus
nTPM: 12.2
Samples: 4

Max nTPM: 13.4
Min nTPM: 10.2
Sample A Female 13.2
Sample B Female 10.2
Sample C Male 13.4
Sample D Male 12.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 231.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 194.0
Samples: 4

Max nTPM: 210.4
Min nTPM: 184.3
Sample A Male 184.3
Sample B Male 194.5
Sample C Female 210.4
Sample D Female 186.7
Hippocampal formation
nTPM: 231.3
Samples: 4

Max nTPM: 242.1
Min nTPM: 219.9
Sample A Male 234.8
Sample B Male 219.9
Sample C Female 228.4
Sample D Female 242.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 16.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 16.8
74580984 Antisense, RP_060215_02_C08, Mouse strain C57BL/6J (56 days, male) 16.8

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.