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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:7.8 nTPM
HPA:7.8 nTPM
GTEx:9.3 nTPM
FANTOM5:23.0 Scaled Tags Per Million
Pig:27.7 nTPM
Mouse:21.3 nTPM
Allen mouse:4.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA040262
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 7.8
Sample id Sample description nTPM
Hippocampus
nTPM: 7.5
1855 Male, age 76, left hemisphere 8.3
2148 Female, age 91, left hemisphere 8.3
1911 Female, age 85, right hemisphere 7.8
1898 Male, age 80, left hemisphere 7.6
2529 Female, age 94, left hemisphere 7.1
2621 Female, age 67, right hemisphere 6.2
Dentate gyrus
nTPM: 7.7
2531 Female, age 67, both hemispheres 8.4
2528 Male, age 74, both hemispheres 8.1
2530 Female, age 94, left hemisphere 7.9
1927 Female, age 91, both hemispheres 7.6
2010 Male, age 76, both hemispheres 7.5
2246 Female, age 85, both hemispheres 6.7
Entorhinal gyrus
nTPM: 7.4
2686 Male, age 75, right hemisphere 8.4
1938 Female, age 85, left hemisphere 7.8
2764 Male, age 80, right hemisphere 7.8
2117 Female, age 91, right hemisphere 7.5
1787 Male, age 76, left hemisphere 6.6
2613 Female, age 94, left hemisphere 6.2
Hippocampus, CA1
nTPM: 7.5
2749 Male, age 80, left hemisphere 8.1
1873 Female, age 85, both hemispheres 8.0
2082 Female, age 91, right hemisphere 7.7
2045 Male, age 76, both hemispheres 7.3
2527 Male, age 74, both hemispheres 6.5
Hippocampus, CA2
nTPM: 7.4
2113 Female, age 91, right hemisphere 8.4
2249 Male, age 74, both hemispheres 8.2
1892 Male, age 76, both hemispheres 7.6
2437 Female, age 94, left hemisphere 7.0
1940 Female, age 85, left hemisphere 6.8
1963 Male, age 80, left hemisphere 6.6
Hippocampus, CA3
nTPM: 7.5
1891 Female, age 85, both hemispheres 8.6
2137 Male, age 80, left hemisphere 7.9
1867 Male, age 76, both hemispheres 7.2
2436 Male, age 74, both hemispheres 7.2
2620 Female, age 94, left hemisphere 7.0
2861 Female, age 67, both hemispheres 6.9
Parahippocampal cortex
nTPM: 7.8
2693 Female, age 94, both hemispheres 8.7
2622 Female, age 67, right hemisphere 8.5
2692 Male, age 74, both hemispheres 8.3
2250 Female, age 67, right hemisphere 8.1
1933 Female, age 85, both hemispheres 7.8
1850 Male, age 80, both hemispheres 7.5
2245 Female, age 91, both hemispheres 7.5
2532 Female, age 72, left hemisphere 7.4
1990 Female, age 91, right hemisphere 7.2
2018 Male, age 76, both hemispheres 7.1
Perirhinal gyrus
nTPM: 7.2
1841 Female, age 85, right hemisphere 7.7
2848 Male, age 76, right hemisphere 7.6
2521 Female, age 94, right hemisphere 7.4
1847 Female, age 91, left hemisphere 7.0
1794 Male, age 80, right hemisphere 6.5
Subiculum
nTPM: 7.0
1977 Female, age 85, both hemispheres 8.2
1901 Male, age 80, both hemispheres 7.7
2729 Female, age 91, right hemisphere 7.0
2619 Male, age 74, both hemispheres 6.6
2042 Male, age 76, both hemispheres 6.5
2438 Female, age 94, left hemisphere 6.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 9.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 9.3
Samples: 197

Max nTPM: 18.2
Min nTPM: 5.8
Std nTPM: 1.9
Median nTPM: 8.9
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 18.2
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 17.2
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 16.3
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 15.6
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 14.9
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 14.6
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 14.5
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 13.5
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 13.3
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 13.3
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 13.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 23.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 23.0
FF:10169-103B7 60 years, female 23.0
FF:10153-102I9 76 years, female 23.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 27.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 27.7
Samples: 4

Max nTPM: 32.3
Min nTPM: 22.3
Sample A Female 32.3
Sample B Female 25.4
Sample C Male 30.8
Sample D Male 22.3
Entorhinal cortex
nTPM: 24.5
Samples: 4

Max nTPM: 29.0
Min nTPM: 21.1
Sample A Female 23.0
Sample B Female 29.0
Sample C Male 24.7
Sample D Male 21.1
Subiculum
nTPM: 26.6
Samples: 4

Max nTPM: 32.2
Min nTPM: 24.1
Sample A Female 32.2
Sample B Female 25.3
Sample C Male 24.1
Sample D Male 24.6
Ventral hippocampus
nTPM: 24.4
Samples: 4

Max nTPM: 26.4
Min nTPM: 23.5
Sample A Female 26.4
Sample B Female 23.9
Sample C Male 23.5
Sample D Male 23.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 21.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 19.6
Samples: 4

Max nTPM: 20.8
Min nTPM: 17.9
Sample A Male 20.3
Sample B Male 19.3
Sample C Female 20.8
Sample D Female 17.9
Hippocampal formation
nTPM: 21.3
Samples: 4

Max nTPM: 22.6
Min nTPM: 19.4
Sample A Male 19.4
Sample B Male 22.1
Sample C Female 21.2
Sample D Female 22.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 4.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.8
69116697 Antisense, RP_050321_01_A01, Mouse strain C57BL/6J (56 days, male) 4.8

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The Human Protein Atlas

The Human Protein Atlas project is funded
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