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AMYGDALA - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:46.9 nTPM
HPA:46.9 nTPM
GTEx:65.7 nTPM
FANTOM5:28.3 Scaled Tags Per Million
Pig:21.8 nTPM
Mouse:101.5 nTPM
Allen mouse:2.5 Expression energy

AMYGDALA - HPA Brain RNA-seq
Max nTPM 46.9
Sample id Sample description nTPM
Amygdala
nTPM: 43.8
2814 Male, age 76, right hemisphere 48.7
2695 Female, age 67, right hemisphere 43.0
2514 Male, age 75, right hemisphere 42.9
1987 Female, age 91, left hemisphere 42.5
2517 Female, age 94, left hemisphere 41.9
Basal amygdala
nTPM: 41.5
2609 Male, age 75, right hemisphere 47.8
2243 Female, age 91, right hemisphere 41.9
2685 Female, age 94, left hemisphere 41.3
1955 Male, age 76, both hemispheres 40.5
2110 Male, age 80, left hemisphere 39.0
2827 Female, age 67, right hemisphere 38.6
Central amygdala
nTPM: 43.6
2826 Female, age 94, left hemisphere 47.2
1905 Male, age 76, both hemispheres 44.9
2515 Male, age 75, right hemisphere 43.1
2239 Male, age 80, left hemisphere 41.5
2701 Female, age 91, right hemisphere 41.2
Corticomedial amygdala
nTPM: 40.9
2428 Male, age 75, right hemisphere 45.1
2829 Male, age 80, left hemisphere 42.7
2240 Male, age 76, both hemispheres 41.5
2429 Female, age 94, left hemisphere 41.5
2242 Female, age 91, right hemisphere 38.8
2535 Female, age 67, right hemisphere 35.5
Lateral amygdala
nTPM: 45.2
2516 Male, age 75, right hemisphere 49.1
1883 Male, age 76, both hemispheres 47.1
2830 Female, age 67, right hemisphere 46.9
2534 Female, age 94, left hemisphere 46.3
2256 Male, age 80, left hemisphere 41.6
2255 Female, age 91, right hemisphere 40.0
Stria terminalis, bed nucleus
nTPM: 46.9
1974 Female, age 91, both hemispheres 49.4
2486 Female, age 94, both hemispheres 47.5
2201 Male, age 74, unknown 43.6

AMYGDALA - GTEx RNA-seqi
Average nTPM 65.7
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 65.7
Samples: 152

Max nTPM: 147.4
Min nTPM: 24.8
Std nTPM: 14.0
Median nTPM: 63.2
GTEX-14JG1-0011-R4b-SM-62LEB 40-49 years, male 147.4
GTEX-11ZU8-0011-R4a-SM-5BC6Y 60-69 years, male 109.1
GTEX-1F75A-0011-R4a-SM-ARL8J 50-59 years, male 106.0
GTEX-16YQH-0011-R4a-SM-7EPGI 30-39 years, male 98.5
GTEX-12ZZW-0011-R4a-SM-5DUX9 50-59 years, male 92.2
GTEX-NL4W-0011-R4a-SM-2I5GZ 50-59 years, male 91.8
GTEX-13O3Q-0011-R4a-SM-5P9H2 50-59 years, male 91.4
GTEX-1JMQJ-0011-R4b-SM-EXUT8 50-59 years, male 90.2
GTEX-17HG3-0011-R4a-SM-7IGLL 30-39 years, female 87.5
GTEX-14JIY-0011-R4b-SM-5ZZV7 60-69 years, male 86.2
GTEX-TSE9-0011-R4A-SM-3DB7H 60-69 years, female 86.1
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AMYGDALA - FANTOM5 CAGEi
Max Scaled Tags Per Million 28.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 28.3
FF:10151-102I7 76 years, female 28.3

AMYGDALA - Pig RNA-seqi
Average nTPM 21.8
Pig sample Sample description nTPM
Amygdala
nTPM: 21.9
Samples: 4

Max nTPM: 24.0
Min nTPM: 20.2
Sample A Female 24.0
Sample B Female 22.5
Sample C Male 20.2
Sample D Male 20.7

AMYGDALA - Mouse RNA-seqi
Average nTPM 101.5
Mouse sample Sample description nTPM
Amygdala
nTPM: 101.5
Samples: 4

Max nTPM: 110.3
Min nTPM: 95.1
Sample A Male 97.4
Sample B Male 103.3
Sample C Female 110.3
Sample D Female 95.1

AMYGDALA - Allen Mouse ISHi
Max Expression energy 2.5
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 2.5
1355 Antisense, RP_040407_02_D10, Mouse strain C57BL/6J (56 days, male) 2.5
1356 Antisense, RP_040407_02_D10, Mouse strain C57BL/6J (56 days, male) 0.0

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.