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AMYGDALA - Expression summary
Mouse brain, Intensity
Amygdalai 		19.926
RNA expressioni
Consensus:63.1 nTPM
HPA:63.1 nTPM
GTEx:45.4 nTPM
FANTOM5:84.2 Scaled Tags Per Million
Pig:12.7 nTPM
Mouse:28.6 nTPM
Allen mouse:4.5 Expression energy

AMYGDALA - Mouse brain profilei , antibody HPA004125
Amygdala mean intensity 19.926
intensityi
FRONT BACK
Nucleus of the lateral olfactory tract 11.097
Basal medial amygdaloid nucleus 3.387
Basal lateral amygdala* -
Basal lateral amygdaloid nucleus 5.863
Cortical amygdala 19.926
Central amygdala 4.831
Medial amygdaloid nucleus 3.193

AMYGDALA - HPA Brain RNA-seq
Max nTPM 63.1
Sample id Sample description nTPM
Amygdala
nTPM: 60.1
2814 Male, age 76, right hemisphere 62.7
2517 Female, age 94, left hemisphere 61.3
1987 Female, age 91, left hemisphere 61.0
2514 Male, age 75, right hemisphere 58.2
2695 Female, age 67, right hemisphere 57.5
Basal amygdala
nTPM: 61.4
2243 Female, age 91, right hemisphere 64.5
2685 Female, age 94, left hemisphere 62.6
2609 Male, age 75, right hemisphere 62.5
1955 Male, age 76, both hemispheres 61.9
2110 Male, age 80, left hemisphere 60.9
2827 Female, age 67, right hemisphere 55.9
Central amygdala
nTPM: 59.6
1905 Male, age 76, both hemispheres 61.6
2239 Male, age 80, left hemisphere 61.3
2515 Male, age 75, right hemisphere 58.9
2701 Female, age 91, right hemisphere 58.7
2826 Female, age 94, left hemisphere 57.8
Corticomedial amygdala
nTPM: 61.2
2829 Male, age 80, left hemisphere 64.0
2242 Female, age 91, right hemisphere 61.8
2429 Female, age 94, left hemisphere 61.3
2428 Male, age 75, right hemisphere 60.2
2535 Female, age 67, right hemisphere 60.2
2240 Male, age 76, both hemispheres 59.9
Lateral amygdala
nTPM: 59.5
1883 Male, age 76, both hemispheres 65.0
2534 Female, age 94, left hemisphere 61.2
2256 Male, age 80, left hemisphere 59.1
2516 Male, age 75, right hemisphere 58.7
2255 Female, age 91, right hemisphere 58.2
2830 Female, age 67, right hemisphere 54.5
Stria terminalis, bed nucleus
nTPM: 63.1
1974 Female, age 91, both hemispheres 65.9
2486 Female, age 94, both hemispheres 63.1
2201 Male, age 74, unknown 60.3

AMYGDALA - GTEx RNA-seqi
Average nTPM 45.4
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 45.4
Samples: 152

Max nTPM: 78.7
Min nTPM: 24.9
Std nTPM: 9.7
Median nTPM: 44.5
GTEX-1HCU6-0011-R4b-SM-ARU74 60-69 years, female 78.7
GTEX-14ASI-0011-R4a-SM-69LQ4 60-69 years, male 73.1
GTEX-1CB4J-0011-R4b-SM-9WG5P 60-69 years, male 70.4
GTEX-1B996-0011-R4b-SM-9OSVO 60-69 years, male 69.1
GTEX-13NYS-0011-R4b-SM-5MR3O 60-69 years, male 67.3
GTEX-1ICLZ-0011-R4a-SM-CMKHL 60-69 years, male 66.8
GTEX-13N1W-0011-R4a-SM-5MR52 70-79 years, male 66.6
GTEX-1F48J-0011-R4b-SM-9OSVX 50-59 years, female 64.9
GTEX-15DDE-0011-R4b-SM-7KULI 50-59 years, female 64.1
GTEX-17HG3-0011-R4a-SM-7IGLL 30-39 years, female 61.2
GTEX-14JG1-0011-R4b-SM-62LEB 40-49 years, male 60.4
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AMYGDALA - FANTOM5 CAGEi
Max Scaled Tags Per Million 84.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 84.2
FF:10151-102I7 76 years, female 84.2

AMYGDALA - Pig RNA-seqi
Average nTPM 12.7
Pig sample Sample description nTPM
Amygdala
nTPM: 12.7
Samples: 4

Max nTPM: 17.3
Min nTPM: 9.8
Sample A Female 17.3
Sample B Female 9.8
Sample C Male 11.1
Sample D Male 12.5

AMYGDALA - Mouse RNA-seqi
Average nTPM 28.6
Mouse sample Sample description nTPM
Amygdala
nTPM: 28.6
Samples: 4

Max nTPM: 29.5
Min nTPM: 27.5
Sample A Male 27.5
Sample B Male 29.0
Sample C Female 29.5
Sample D Female 28.5

AMYGDALA - Allen Mouse ISHi
Max Expression energy 4.5
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 4.5
76003692 Antisense, RP_060608_03_B06, Mouse strain C57BL/6J (56 days, male) 4.5

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.