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HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:40.3 nTPM
HPA:40.3 nTPM
GTEx:33.9 nTPM
FANTOM5:84.9 Scaled Tags Per Million
Pig:49.1 nTPM
Mouse:208.4 nTPM
Allen mouse:14.4 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 40.3
Sample id Sample description nTPM
Hippocampus
nTPM: 22.8
2621 Female, age 67, right hemisphere 31.3
2148 Female, age 91, left hemisphere 30.4
1898 Male, age 80, left hemisphere 20.8
1855 Male, age 76, left hemisphere 19.0
1911 Female, age 85, right hemisphere 18.8
2529 Female, age 94, left hemisphere 16.5
Dentate gyrus
nTPM: 25.0
2531 Female, age 67, both hemispheres 41.0
1927 Female, age 91, both hemispheres 30.0
2246 Female, age 85, both hemispheres 26.7
2528 Male, age 74, both hemispheres 21.6
2530 Female, age 94, left hemisphere 18.4
2010 Male, age 76, both hemispheres 12.0
Entorhinal gyrus
nTPM: 34.1
1938 Female, age 85, left hemisphere 42.8
2613 Female, age 94, left hemisphere 38.8
2764 Male, age 80, right hemisphere 38.1
1787 Male, age 76, left hemisphere 35.3
2686 Male, age 75, right hemisphere 28.4
2117 Female, age 91, right hemisphere 21.5
Hippocampus, CA1
nTPM: 25.4
2749 Male, age 80, left hemisphere 29.4
2082 Female, age 91, right hemisphere 27.9
2045 Male, age 76, both hemispheres 27.0
2527 Male, age 74, both hemispheres 23.6
1873 Female, age 85, both hemispheres 19.2
Hippocampus, CA2
nTPM: 22.1
2113 Female, age 91, right hemisphere 32.8
2437 Female, age 94, left hemisphere 28.2
1940 Female, age 85, left hemisphere 21.6
1892 Male, age 76, both hemispheres 19.4
2249 Male, age 74, both hemispheres 15.8
1963 Male, age 80, left hemisphere 14.7
Hippocampus, CA3
nTPM: 31.7
2620 Female, age 94, left hemisphere 56.9
2861 Female, age 67, both hemispheres 45.3
2137 Male, age 80, left hemisphere 33.5
2436 Male, age 74, both hemispheres 24.3
1891 Female, age 85, both hemispheres 16.6
1867 Male, age 76, both hemispheres 13.7
Parahippocampal cortex
nTPM: 32.3
2245 Female, age 91, both hemispheres 47.3
1933 Female, age 85, both hemispheres 38.3
2622 Female, age 67, right hemisphere 36.9
2693 Female, age 94, both hemispheres 31.8
2250 Female, age 67, right hemisphere 31.3
1850 Male, age 80, both hemispheres 31.0
1990 Female, age 91, right hemisphere 28.5
2532 Female, age 72, left hemisphere 28.5
2692 Male, age 74, both hemispheres 26.3
2018 Male, age 76, both hemispheres 22.7
Perirhinal gyrus
nTPM: 40.3
1847 Female, age 91, left hemisphere 50.9
1794 Male, age 80, right hemisphere 47.6
2848 Male, age 76, right hemisphere 39.4
2521 Female, age 94, right hemisphere 33.7
1841 Female, age 85, right hemisphere 29.7
Subiculum
nTPM: 20.9
2729 Female, age 91, right hemisphere 25.0
2619 Male, age 74, both hemispheres 24.8
1977 Female, age 85, both hemispheres 22.0
2438 Female, age 94, left hemisphere 20.7
1901 Male, age 80, both hemispheres 17.8
2042 Male, age 76, both hemispheres 15.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 33.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 33.9
Samples: 197

Max nTPM: 75.4
Min nTPM: 8.7
Std nTPM: 13.6
Median nTPM: 32.1
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 75.4
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 71.7
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 70.0
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 66.3
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 66.2
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 65.0
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 64.2
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 63.5
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 63.1
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 62.7
GTEX-11EI6-0011-R1a-SM-DO93L 60-69 years, male 60.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 84.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 84.9
FF:10169-103B7 60 years, female 88.9
FF:10153-102I9 76 years, female 80.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 49.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 49.1
Samples: 4

Max nTPM: 61.4
Min nTPM: 35.6
Sample A Female 50.6
Sample B Female 61.4
Sample C Male 35.6
Sample D Male 48.8
Entorhinal cortex
nTPM: 42.3
Samples: 4

Max nTPM: 50.8
Min nTPM: 33.9
Sample A Female 47.4
Sample B Female 33.9
Sample C Male 50.8
Sample D Male 37.2
Subiculum
nTPM: 37.2
Samples: 4

Max nTPM: 45.0
Min nTPM: 32.0
Sample A Female 45.0
Sample B Female 33.0
Sample C Male 38.7
Sample D Male 32.0
Ventral hippocampus
nTPM: 43.8
Samples: 4

Max nTPM: 54.6
Min nTPM: 31.2
Sample A Female 31.2
Sample B Female 37.0
Sample C Male 54.6
Sample D Male 52.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 208.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 208.5
Samples: 4

Max nTPM: 218.5
Min nTPM: 197.2
Sample A Male 218.5
Sample B Male 215.9
Sample C Female 197.2
Sample D Female 202.2
Hippocampal formation
nTPM: 172.0
Samples: 4

Max nTPM: 186.3
Min nTPM: 164.1
Sample A Male 186.3
Sample B Male 173.0
Sample C Female 164.5
Sample D Female 164.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 14.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 14.4
393201 Antisense, RP_040804_02_C11, Mouse strain C57BL/6J (56 days, male) 14.4

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