ABOUTMENU
HELP
NEWS
SLC27A4
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:22.7 nTPM
HPA:22.7 nTPM
GTEx:24.8 nTPM
FANTOM5:17.3 Scaled Tags Per Million
Pig:10.8 nTPM
Mouse:44.9 nTPM
Allen mouse:4.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA007293Antibody CAB009771
Glial cells LowNot detected
Neuronal cells MediumMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 22.7
Sample id Sample description nTPM
Hippocampus
nTPM: 19.1
1898 Male, age 80, left hemisphere 22.2
2148 Female, age 91, left hemisphere 19.8
1855 Male, age 76, left hemisphere 19.1
2621 Female, age 67, right hemisphere 18.7
2529 Female, age 94, left hemisphere 18.5
1911 Female, age 85, right hemisphere 16.0
Dentate gyrus
nTPM: 19.9
2530 Female, age 94, left hemisphere 22.7
1927 Female, age 91, both hemispheres 21.7
2010 Male, age 76, both hemispheres 20.1
2528 Male, age 74, both hemispheres 19.6
2246 Female, age 85, both hemispheres 17.9
2531 Female, age 67, both hemispheres 17.5
Entorhinal gyrus
nTPM: 22.0
2613 Female, age 94, left hemisphere 27.9
2764 Male, age 80, right hemisphere 24.7
1787 Male, age 76, left hemisphere 21.7
1938 Female, age 85, left hemisphere 19.6
2686 Male, age 75, right hemisphere 19.2
2117 Female, age 91, right hemisphere 19.1
Hippocampus, CA1
nTPM: 20.1
2749 Male, age 80, left hemisphere 25.9
1873 Female, age 85, both hemispheres 20.0
2082 Female, age 91, right hemisphere 18.5
2527 Male, age 74, both hemispheres 18.3
2045 Male, age 76, both hemispheres 17.9
Hippocampus, CA2
nTPM: 20.9
1892 Male, age 76, both hemispheres 24.2
2437 Female, age 94, left hemisphere 23.3
1963 Male, age 80, left hemisphere 22.1
2113 Female, age 91, right hemisphere 18.7
1940 Female, age 85, left hemisphere 18.5
2249 Male, age 74, both hemispheres 18.5
Hippocampus, CA3
nTPM: 19.9
2620 Female, age 94, left hemisphere 21.6
2137 Male, age 80, left hemisphere 21.4
1867 Male, age 76, both hemispheres 21.0
2861 Female, age 67, both hemispheres 19.1
2436 Male, age 74, both hemispheres 18.5
1891 Female, age 85, both hemispheres 17.7
Parahippocampal cortex
nTPM: 20.6
1850 Male, age 80, both hemispheres 22.0
1990 Female, age 91, right hemisphere 21.7
2693 Female, age 94, both hemispheres 21.6
2245 Female, age 91, both hemispheres 21.1
1933 Female, age 85, both hemispheres 21.0
2532 Female, age 72, left hemisphere 20.8
2622 Female, age 67, right hemisphere 20.2
2692 Male, age 74, both hemispheres 19.5
2018 Male, age 76, both hemispheres 19.2
2250 Female, age 67, right hemisphere 19.0
Perirhinal gyrus
nTPM: 22.7
2521 Female, age 94, right hemisphere 25.2
1847 Female, age 91, left hemisphere 24.4
1794 Male, age 80, right hemisphere 23.6
1841 Female, age 85, right hemisphere 21.0
2848 Male, age 76, right hemisphere 19.4
Subiculum
nTPM: 19.6
1901 Male, age 80, both hemispheres 21.5
1977 Female, age 85, both hemispheres 20.4
2619 Male, age 74, both hemispheres 20.4
2438 Female, age 94, left hemisphere 19.9
2729 Female, age 91, right hemisphere 18.0
2042 Male, age 76, both hemispheres 17.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 24.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 24.8
Samples: 197

Max nTPM: 45.3
Min nTPM: 8.4
Std nTPM: 7.6
Median nTPM: 24.1
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 45.3
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 43.7
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 43.2
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 43.0
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 41.8
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 41.0
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 40.9
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 40.2
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 40.0
GTEX-17HHY-0011-R1a-SM-7189V 50-59 years, male 39.8
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 39.6
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 17.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 17.3
FF:10153-102I9 76 years, female 17.9
FF:10169-103B7 60 years, female 16.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 10.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 10.8
Samples: 4

Max nTPM: 13.0
Min nTPM: 7.1
Sample A Female 13.0
Sample B Female 11.1
Sample C Male 11.8
Sample D Male 7.1
Entorhinal cortex
nTPM: 9.4
Samples: 4

Max nTPM: 9.9
Min nTPM: 9.1
Sample A Female 9.2
Sample B Female 9.5
Sample C Male 9.9
Sample D Male 9.1
Subiculum
nTPM: 8.9
Samples: 4

Max nTPM: 10.2
Min nTPM: 8.3
Sample A Female 10.2
Sample B Female 8.3
Sample C Male 8.9
Sample D Male 8.3
Ventral hippocampus
nTPM: 9.5
Samples: 4

Max nTPM: 11.7
Min nTPM: 6.5
Sample A Female 9.2
Sample B Female 6.5
Sample C Male 11.7
Sample D Male 10.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 44.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 44.9
Samples: 4

Max nTPM: 50.7
Min nTPM: 41.9
Sample A Male 41.9
Sample B Male 42.3
Sample C Female 44.5
Sample D Female 50.7
Hippocampal formation
nTPM: 44.6
Samples: 4

Max nTPM: 52.8
Min nTPM: 37.9
Sample A Male 37.9
Sample B Male 42.9
Sample C Female 52.8
Sample D Female 44.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 4.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.8
1920 Antisense, RP_040507_02_E04, Mouse strain C57BL/6J (56 days, male) 4.8
1921 Antisense, RP_040507_02_E04, Mouse strain C57BL/6J (56 days, male) 4.1

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.