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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:57.6 nTPM
HPA:57.6 nTPM
GTEx:259.3 nTPM
FANTOM5:182.0 Scaled Tags Per Million
Pig:84.9 nTPM
Mouse:143.7 nTPM
Allen mouse:4.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA023617Antibody HPA050655
Glial cells Not detectedNot detected
Neuronal cells Not detectedNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 57.6
Sample id Sample description nTPM
Hippocampus
nTPM: 57.0
1855 Male, age 76, left hemisphere 62.5
2148 Female, age 91, left hemisphere 58.9
1911 Female, age 85, right hemisphere 57.7
1898 Male, age 80, left hemisphere 55.2
2621 Female, age 67, right hemisphere 54.0
2529 Female, age 94, left hemisphere 53.9
Dentate gyrus
nTPM: 52.9
2528 Male, age 74, both hemispheres 61.9
1927 Female, age 91, both hemispheres 56.3
2246 Female, age 85, both hemispheres 54.4
2530 Female, age 94, left hemisphere 51.3
2010 Male, age 76, both hemispheres 51.1
2531 Female, age 67, both hemispheres 42.6
Entorhinal gyrus
nTPM: 57.3
2117 Female, age 91, right hemisphere 70.1
1938 Female, age 85, left hemisphere 63.1
2613 Female, age 94, left hemisphere 60.2
2764 Male, age 80, right hemisphere 56.8
1787 Male, age 76, left hemisphere 47.6
2686 Male, age 75, right hemisphere 46.0
Hippocampus, CA1
nTPM: 57.5
2082 Female, age 91, right hemisphere 66.0
2527 Male, age 74, both hemispheres 58.8
1873 Female, age 85, both hemispheres 58.3
2045 Male, age 76, both hemispheres 54.8
2749 Male, age 80, left hemisphere 49.6
Hippocampus, CA2
nTPM: 55.2
2113 Female, age 91, right hemisphere 63.8
2249 Male, age 74, both hemispheres 56.2
1963 Male, age 80, left hemisphere 55.9
1940 Female, age 85, left hemisphere 53.5
2437 Female, age 94, left hemisphere 52.3
1892 Male, age 76, both hemispheres 49.6
Hippocampus, CA3
nTPM: 54.1
1891 Female, age 85, both hemispheres 61.1
2436 Male, age 74, both hemispheres 55.2
2861 Female, age 67, both hemispheres 55.1
2620 Female, age 94, left hemisphere 52.5
2137 Male, age 80, left hemisphere 51.1
1867 Male, age 76, both hemispheres 49.6
Parahippocampal cortex
nTPM: 57.6
2692 Male, age 74, both hemispheres 67.2
1933 Female, age 85, both hemispheres 64.4
2622 Female, age 67, right hemisphere 62.2
1990 Female, age 91, right hemisphere 59.5
2250 Female, age 67, right hemisphere 57.8
2693 Female, age 94, both hemispheres 57.1
1850 Male, age 80, both hemispheres 55.3
2018 Male, age 76, both hemispheres 53.6
2532 Female, age 72, left hemisphere 49.9
2245 Female, age 91, both hemispheres 49.4
Perirhinal gyrus
nTPM: 54.2
1794 Male, age 80, right hemisphere 57.0
1841 Female, age 85, right hemisphere 56.3
1847 Female, age 91, left hemisphere 55.5
2521 Female, age 94, right hemisphere 54.0
2848 Male, age 76, right hemisphere 48.3
Subiculum
nTPM: 57.4
2729 Female, age 91, right hemisphere 71.2
2619 Male, age 74, both hemispheres 60.1
1977 Female, age 85, both hemispheres 58.0
2042 Male, age 76, both hemispheres 55.8
1901 Male, age 80, both hemispheres 55.4
2438 Female, age 94, left hemisphere 43.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 259.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 259.3
Samples: 197

Max nTPM: 653.2
Min nTPM: 48.1
Std nTPM: 108.1
Median nTPM: 245.3
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 653.2
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 592.2
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 584.0
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 574.6
GTEX-17JCI-0011-R1b-SM-718A3 60-69 years, female 544.2
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 537.1
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 482.4
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 479.9
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 479.1
GTEX-14PJO-0011-R1b-SM-6AJAK 60-69 years, male 474.4
GTEX-1F75W-0011-R1a-SM-ARU81 60-69 years, male 465.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 182.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 182.0
FF:10153-102I9 76 years, female 243.8
FF:10169-103B7 60 years, female 120.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 84.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 84.9
Samples: 4

Max nTPM: 99.3
Min nTPM: 68.5
Sample A Female 89.9
Sample B Female 81.9
Sample C Male 99.3
Sample D Male 68.5
Entorhinal cortex
nTPM: 77.6
Samples: 4

Max nTPM: 86.3
Min nTPM: 63.7
Sample A Female 63.7
Sample B Female 86.3
Sample C Male 85.6
Sample D Male 74.7
Subiculum
nTPM: 76.3
Samples: 4

Max nTPM: 88.5
Min nTPM: 59.5
Sample A Female 88.5
Sample B Female 82.7
Sample C Male 74.4
Sample D Male 59.5
Ventral hippocampus
nTPM: 78.7
Samples: 4

Max nTPM: 102.7
Min nTPM: 53.7
Sample A Female 53.7
Sample B Female 66.7
Sample C Male 102.7
Sample D Male 91.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 143.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 143.6
Samples: 4

Max nTPM: 145.4
Min nTPM: 141.4
Sample A Male 142.4
Sample B Male 145.3
Sample C Female 141.4
Sample D Female 145.4
Hippocampal formation
nTPM: 122.8
Samples: 4

Max nTPM: 151.9
Min nTPM: 108.1
Sample A Male 122.9
Sample B Male 108.4
Sample C Female 108.1
Sample D Female 151.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 4.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.7
70919830 Antisense, RP_050713_02_B05, Mouse strain C57BL/6J (56 days, male) 4.7

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The Human Protein Atlas

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