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YIF1B
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:30.2 nTPM
HPA:30.2 nTPM
GTEx:41.0 nTPM
FANTOM5:26.9 Scaled Tags Per Million
Pig:13.9 nTPM
Mouse:41.1 nTPM
Allen mouse:0.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA055257Antibody HPA062675
Glial cells Not detectedNot detected
Neuronal cells LowLow




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 30.2
Sample id Sample description nTPM
Hippocampus
nTPM: 29.1
1898 Male, age 80, left hemisphere 32.5
1855 Male, age 76, left hemisphere 31.9
2621 Female, age 67, right hemisphere 29.2
2529 Female, age 94, left hemisphere 28.0
1911 Female, age 85, right hemisphere 27.7
2148 Female, age 91, left hemisphere 25.6
Dentate gyrus
nTPM: 28.9
2530 Female, age 94, left hemisphere 33.3
2010 Male, age 76, both hemispheres 30.1
2528 Male, age 74, both hemispheres 29.3
1927 Female, age 91, both hemispheres 28.8
2246 Female, age 85, both hemispheres 27.1
2531 Female, age 67, both hemispheres 25.0
Entorhinal gyrus
nTPM: 29.9
2764 Male, age 80, right hemisphere 33.6
2117 Female, age 91, right hemisphere 31.8
2613 Female, age 94, left hemisphere 30.3
1787 Male, age 76, left hemisphere 29.7
1938 Female, age 85, left hemisphere 29.0
2686 Male, age 75, right hemisphere 25.0
Hippocampus, CA1
nTPM: 30.2
2749 Male, age 80, left hemisphere 35.9
1873 Female, age 85, both hemispheres 29.6
2527 Male, age 74, both hemispheres 29.3
2045 Male, age 76, both hemispheres 28.0
2082 Female, age 91, right hemisphere 28.0
Hippocampus, CA2
nTPM: 30.2
1892 Male, age 76, both hemispheres 32.5
2437 Female, age 94, left hemisphere 32.5
1963 Male, age 80, left hemisphere 31.5
2249 Male, age 74, both hemispheres 31.3
2113 Female, age 91, right hemisphere 26.9
1940 Female, age 85, left hemisphere 26.7
Hippocampus, CA3
nTPM: 29.3
2436 Male, age 74, both hemispheres 30.9
1867 Male, age 76, both hemispheres 30.7
2620 Female, age 94, left hemisphere 30.6
2137 Male, age 80, left hemisphere 30.5
1891 Female, age 85, both hemispheres 27.6
2861 Female, age 67, both hemispheres 25.8
Parahippocampal cortex
nTPM: 28.3
1850 Male, age 80, both hemispheres 30.4
2018 Male, age 76, both hemispheres 29.3
1933 Female, age 85, both hemispheres 29.2
2250 Female, age 67, right hemisphere 29.1
1990 Female, age 91, right hemisphere 28.8
2532 Female, age 72, left hemisphere 28.7
2693 Female, age 94, both hemispheres 27.5
2245 Female, age 91, both hemispheres 27.0
2622 Female, age 67, right hemisphere 26.5
2692 Male, age 74, both hemispheres 26.4
Perirhinal gyrus
nTPM: 29.2
1794 Male, age 80, right hemisphere 32.0
1847 Female, age 91, left hemisphere 30.4
2521 Female, age 94, right hemisphere 28.3
1841 Female, age 85, right hemisphere 27.7
2848 Male, age 76, right hemisphere 27.4
Subiculum
nTPM: 30.0
1901 Male, age 80, both hemispheres 31.4
2619 Male, age 74, both hemispheres 31.0
2042 Male, age 76, both hemispheres 30.6
1977 Female, age 85, both hemispheres 29.9
2438 Female, age 94, left hemisphere 29.8
2729 Female, age 91, right hemisphere 27.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 41.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 41.0
Samples: 197

Max nTPM: 70.3
Min nTPM: 18.4
Std nTPM: 8.8
Median nTPM: 40.3
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 70.3
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 67.1
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 64.9
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 63.9
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 63.2
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 61.9
GTEX-17HHY-0011-R1a-SM-7189V 50-59 years, male 59.1
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 58.1
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 55.6
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 54.5
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 54.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 26.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 26.9
FF:10153-102I9 76 years, female 30.9
FF:10169-103B7 60 years, female 23.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 13.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 13.9
Samples: 4

Max nTPM: 19.6
Min nTPM: 9.8
Sample A Female 19.6
Sample B Female 12.9
Sample C Male 13.3
Sample D Male 9.8
Entorhinal cortex
nTPM: 13.1
Samples: 4

Max nTPM: 14.4
Min nTPM: 11.5
Sample A Female 14.4
Sample B Female 13.3
Sample C Male 13.0
Sample D Male 11.5
Subiculum
nTPM: 11.8
Samples: 4

Max nTPM: 15.9
Min nTPM: 10.0
Sample A Female 15.9
Sample B Female 10.0
Sample C Male 10.5
Sample D Male 10.9
Ventral hippocampus
nTPM: 13.9
Samples: 4

Max nTPM: 16.6
Min nTPM: 9.6
Sample A Female 13.8
Sample B Female 9.6
Sample C Male 16.6
Sample D Male 15.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 41.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 40.5
Samples: 4

Max nTPM: 45.3
Min nTPM: 36.7
Sample A Male 38.4
Sample B Male 45.3
Sample C Female 41.4
Sample D Female 36.7
Hippocampal formation
nTPM: 41.1
Samples: 4

Max nTPM: 50.0
Min nTPM: 36.2
Sample A Male 40.1
Sample B Male 36.2
Sample C Female 38.2
Sample D Female 50.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.9
69446905 Antisense, RP_050419_01_H06, Mouse strain C57BL/6J (56 days, male) 0.9

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The Human Protein Atlas

The Human Protein Atlas project is funded
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