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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:740.9 nTPM
HPA:740.9 nTPM
GTEx:637.1 nTPM
FANTOM5:619.8 Scaled Tags Per Million
Pig:430.3 nTPM
Mouse:625.0 nTPM
Allen mouse:22.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA040534Antibody HPA057351Antibody CAB007795
Glial cells MediumNot detectedMedium
Neuronal cells MediumMediumMedium







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 740.9
Sample id Sample description nTPM
Hippocampus
nTPM: 740.4
2621 Female, age 67, right hemisphere 764.6
2148 Female, age 91, left hemisphere 761.0
2529 Female, age 94, left hemisphere 755.0
1898 Male, age 80, left hemisphere 744.3
1855 Male, age 76, left hemisphere 715.5
1911 Female, age 85, right hemisphere 702.2
Dentate gyrus
nTPM: 735.7
2531 Female, age 67, both hemispheres 775.6
2530 Female, age 94, left hemisphere 770.1
2528 Male, age 74, both hemispheres 734.7
1927 Female, age 91, both hemispheres 729.9
2010 Male, age 76, both hemispheres 708.7
2246 Female, age 85, both hemispheres 695.0
Entorhinal gyrus
nTPM: 740.9
2613 Female, age 94, left hemisphere 772.4
2686 Male, age 75, right hemisphere 752.6
2117 Female, age 91, right hemisphere 746.8
2764 Male, age 80, right hemisphere 742.3
1938 Female, age 85, left hemisphere 716.3
1787 Male, age 76, left hemisphere 714.9
Hippocampus, CA1
nTPM: 710.6
2527 Male, age 74, both hemispheres 722.4
1873 Female, age 85, both hemispheres 719.1
2749 Male, age 80, left hemisphere 718.0
2082 Female, age 91, right hemisphere 715.1
2045 Male, age 76, both hemispheres 678.7
Hippocampus, CA2
nTPM: 736.1
1963 Male, age 80, left hemisphere 844.7
2437 Female, age 94, left hemisphere 762.8
2113 Female, age 91, right hemisphere 733.8
1892 Male, age 76, both hemispheres 720.3
1940 Female, age 85, left hemisphere 697.5
2249 Male, age 74, both hemispheres 657.4
Hippocampus, CA3
nTPM: 734.8
2861 Female, age 67, both hemispheres 825.4
2620 Female, age 94, left hemisphere 747.7
2436 Male, age 74, both hemispheres 729.1
2137 Male, age 80, left hemisphere 713.9
1867 Male, age 76, both hemispheres 700.4
1891 Female, age 85, both hemispheres 692.4
Parahippocampal cortex
nTPM: 719.0
2245 Female, age 91, both hemispheres 759.4
2622 Female, age 67, right hemisphere 747.6
2532 Female, age 72, left hemisphere 730.5
1990 Female, age 91, right hemisphere 716.8
2250 Female, age 67, right hemisphere 715.3
1933 Female, age 85, both hemispheres 711.5
1850 Male, age 80, both hemispheres 710.7
2018 Male, age 76, both hemispheres 706.0
2692 Male, age 74, both hemispheres 698.8
2693 Female, age 94, both hemispheres 693.4
Perirhinal gyrus
nTPM: 731.8
1847 Female, age 91, left hemisphere 754.9
1794 Male, age 80, right hemisphere 754.2
2521 Female, age 94, right hemisphere 750.7
1841 Female, age 85, right hemisphere 723.5
2848 Male, age 76, right hemisphere 676.0
Subiculum
nTPM: 701.2
2619 Male, age 74, both hemispheres 736.7
2729 Female, age 91, right hemisphere 721.0
1977 Female, age 85, both hemispheres 716.0
2438 Female, age 94, left hemisphere 691.6
1901 Male, age 80, both hemispheres 671.5
2042 Male, age 76, both hemispheres 670.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 637.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 637.1
Samples: 197

Max nTPM: 1783.6
Min nTPM: 267.5
Std nTPM: 212.2
Median nTPM: 594.1
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 1783.6
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 1157.5
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 1144.9
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 1135.7
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 1134.4
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 1125.8
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 1113.0
GTEX-132Q8-0011-R1a-SM-5EGLK 60-69 years, male 1079.5
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 1074.9
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 1061.1
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 1025.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 619.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 619.8
FF:10153-102I9 76 years, female 685.2
FF:10169-103B7 60 years, female 554.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 430.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 379.8
Samples: 4

Max nTPM: 443.7
Min nTPM: 317.7
Sample A Female 443.7
Sample B Female 375.5
Sample C Male 382.2
Sample D Male 317.7
Entorhinal cortex
nTPM: 430.3
Samples: 4

Max nTPM: 499.3
Min nTPM: 346.8
Sample A Female 412.4
Sample B Female 499.3
Sample C Male 462.6
Sample D Male 346.8
Subiculum
nTPM: 386.9
Samples: 4

Max nTPM: 527.5
Min nTPM: 308.7
Sample A Female 527.5
Sample B Female 369.0
Sample C Male 342.4
Sample D Male 308.7
Ventral hippocampus
nTPM: 366.2
Samples: 4

Max nTPM: 468.8
Min nTPM: 305.0
Sample A Female 325.1
Sample B Female 305.0
Sample C Male 468.8
Sample D Male 365.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 625.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 625.0
Samples: 4

Max nTPM: 651.5
Min nTPM: 593.0
Sample A Male 651.5
Sample B Male 593.0
Sample C Female 608.4
Sample D Female 647.1
Hippocampal formation
nTPM: 622.3
Samples: 4

Max nTPM: 669.1
Min nTPM: 593.9
Sample A Male 593.9
Sample B Male 601.1
Sample C Female 624.9
Sample D Female 669.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 22.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 22.8
308055136 Antisense, RP_140710_01_A05, Mouse strain C57BL/6J (56 days, male) 27.1
67936204 Antisense, RP_041102_01_B02, Mouse strain C57BL/6J (56 days, male) 18.5

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.