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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: High
RNA expressioni
Consensus:79.9 nTPM
HPA:79.9 nTPM
GTEx:79.7 nTPM
FANTOM5:86.0 Scaled Tags Per Million
Pig:85.7 nTPM
Mouse:120.5 nTPM
Allen mouse:15.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA039426Antibody HPA039685
Glial cells LowNot detected
Neuronal cells HighMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 79.9
Sample id Sample description nTPM
Hippocampus
nTPM: 53.7
1898 Male, age 80, left hemisphere 69.4
2621 Female, age 67, right hemisphere 59.9
1855 Male, age 76, left hemisphere 54.1
2148 Female, age 91, left hemisphere 53.7
2529 Female, age 94, left hemisphere 42.9
1911 Female, age 85, right hemisphere 42.2
Dentate gyrus
nTPM: 59.3
1927 Female, age 91, both hemispheres 67.1
2530 Female, age 94, left hemisphere 62.7
2531 Female, age 67, both hemispheres 62.2
2010 Male, age 76, both hemispheres 56.1
2246 Female, age 85, both hemispheres 54.5
2528 Male, age 74, both hemispheres 53.2
Entorhinal gyrus
nTPM: 68.2
2613 Female, age 94, left hemisphere 85.1
2764 Male, age 80, right hemisphere 79.5
1938 Female, age 85, left hemisphere 73.6
1787 Male, age 76, left hemisphere 66.5
2686 Male, age 75, right hemisphere 59.1
2117 Female, age 91, right hemisphere 45.8
Hippocampus, CA1
nTPM: 64.2
2749 Male, age 80, left hemisphere 98.9
1873 Female, age 85, both hemispheres 60.8
2045 Male, age 76, both hemispheres 58.3
2082 Female, age 91, right hemisphere 54.4
2527 Male, age 74, both hemispheres 48.8
Hippocampus, CA2
nTPM: 58.4
1892 Male, age 76, both hemispheres 75.2
1963 Male, age 80, left hemisphere 70.3
2437 Female, age 94, left hemisphere 56.5
1940 Female, age 85, left hemisphere 56.1
2113 Female, age 91, right hemisphere 48.8
2249 Male, age 74, both hemispheres 43.4
Hippocampus, CA3
nTPM: 65.9
2137 Male, age 80, left hemisphere 84.6
2620 Female, age 94, left hemisphere 84.3
2861 Female, age 67, both hemispheres 68.3
1867 Male, age 76, both hemispheres 64.1
1891 Female, age 85, both hemispheres 48.4
2436 Male, age 74, both hemispheres 45.6
Parahippocampal cortex
nTPM: 63.7
1850 Male, age 80, both hemispheres 81.0
2622 Female, age 67, right hemisphere 67.1
2532 Female, age 72, left hemisphere 67.0
1990 Female, age 91, right hemisphere 65.8
2245 Female, age 91, both hemispheres 65.8
1933 Female, age 85, both hemispheres 65.0
2693 Female, age 94, both hemispheres 64.3
2692 Male, age 74, both hemispheres 55.4
2250 Female, age 67, right hemisphere 54.7
2018 Male, age 76, both hemispheres 51.5
Perirhinal gyrus
nTPM: 79.9
1794 Male, age 80, right hemisphere 91.2
1847 Female, age 91, left hemisphere 88.5
2848 Male, age 76, right hemisphere 75.9
1841 Female, age 85, right hemisphere 74.8
2521 Female, age 94, right hemisphere 69.0
Subiculum
nTPM: 51.1
1977 Female, age 85, both hemispheres 64.2
1901 Male, age 80, both hemispheres 59.0
2619 Male, age 74, both hemispheres 51.6
2438 Female, age 94, left hemisphere 45.6
2042 Male, age 76, both hemispheres 44.7
2729 Female, age 91, right hemisphere 41.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 79.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 79.7
Samples: 197

Max nTPM: 172.2
Min nTPM: 26.8
Std nTPM: 35.7
Median nTPM: 76.6
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 172.2
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 163.5
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 158.5
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 158.3
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 157.7
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 154.2
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 150.3
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 145.4
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 144.7
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 144.6
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 143.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 86.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 86.0
FF:10169-103B7 60 years, female 87.8
FF:10153-102I9 76 years, female 84.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 85.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 84.6
Samples: 4

Max nTPM: 112.4
Min nTPM: 59.5
Sample A Female 112.4
Sample B Female 92.6
Sample C Male 73.8
Sample D Male 59.5
Entorhinal cortex
nTPM: 82.7
Samples: 4

Max nTPM: 88.9
Min nTPM: 73.6
Sample A Female 88.9
Sample B Female 83.2
Sample C Male 84.9
Sample D Male 73.6
Subiculum
nTPM: 74.0
Samples: 4

Max nTPM: 98.1
Min nTPM: 59.0
Sample A Female 98.1
Sample B Female 65.1
Sample C Male 73.9
Sample D Male 59.0
Ventral hippocampus
nTPM: 85.7
Samples: 4

Max nTPM: 113.3
Min nTPM: 54.1
Sample A Female 75.7
Sample B Female 54.1
Sample C Male 99.6
Sample D Male 113.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 120.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 120.5
Samples: 4

Max nTPM: 137.0
Min nTPM: 113.5
Sample A Male 113.5
Sample B Male 117.4
Sample C Female 114.1
Sample D Female 137.0
Hippocampal formation
nTPM: 120.2
Samples: 4

Max nTPM: 135.3
Min nTPM: 112.0
Sample A Male 112.0
Sample B Male 119.2
Sample C Female 135.3
Sample D Female 114.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 15.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 15.1
69528112 Antisense, RP_050421_03_B05, Mouse strain C57BL/6J (56 days, male) 15.1

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