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HID1
AMYGDALA - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:21.7 nTPM
HPA:21.7 nTPM
GTEx:21.1 nTPM
FANTOM5:43.6 Scaled Tags Per Million
Pig:16.7 nTPM
Mouse:50.6 nTPM
Allen mouse:4.3 Expression energy

AMYGDALA - HPA Brain RNA-seq
Max nTPM 21.7
Sample id Sample description nTPM
Amygdala
nTPM: 12.3
2814 Male, age 76, right hemisphere 19.5
2517 Female, age 94, left hemisphere 13.6
1987 Female, age 91, left hemisphere 10.9
2514 Male, age 75, right hemisphere 10.5
2695 Female, age 67, right hemisphere 7.0
Basal amygdala
nTPM: 17.3
2685 Female, age 94, left hemisphere 23.9
2827 Female, age 67, right hemisphere 23.7
2243 Female, age 91, right hemisphere 18.8
2110 Male, age 80, left hemisphere 13.5
1955 Male, age 76, both hemispheres 12.5
2609 Male, age 75, right hemisphere 11.5
Central amygdala
nTPM: 16.6
2701 Female, age 91, right hemisphere 18.7
2826 Female, age 94, left hemisphere 18.5
2239 Male, age 80, left hemisphere 18.2
1905 Male, age 76, both hemispheres 17.8
2515 Male, age 75, right hemisphere 9.9
Corticomedial amygdala
nTPM: 15.6
2535 Female, age 67, right hemisphere 21.0
2429 Female, age 94, left hemisphere 20.1
2829 Male, age 80, left hemisphere 16.9
2242 Female, age 91, right hemisphere 13.5
2240 Male, age 76, both hemispheres 11.2
2428 Male, age 75, right hemisphere 11.1
Lateral amygdala
nTPM: 19.5
2830 Female, age 67, right hemisphere 28.0
2255 Female, age 91, right hemisphere 21.9
2534 Female, age 94, left hemisphere 20.8
2256 Male, age 80, left hemisphere 19.3
1883 Male, age 76, both hemispheres 14.4
2516 Male, age 75, right hemisphere 12.4
Stria terminalis, bed nucleus
nTPM: 21.7
2486 Female, age 94, both hemispheres 25.7
2201 Male, age 74, unknown 21.4
1974 Female, age 91, both hemispheres 18.2

AMYGDALA - GTEx RNA-seqi
Average nTPM 21.1
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 21.1
Samples: 152

Max nTPM: 50.8
Min nTPM: 3.7
Std nTPM: 7.8
Median nTPM: 20.4
GTEX-1HCU6-0011-R4b-SM-ARU74 60-69 years, female 50.8
GTEX-131XH-0011-R4b-SM-5DUWB 50-59 years, male 46.0
GTEX-ZAB4-0011-R4a-SM-4SOKB 40-49 years, male 41.8
GTEX-XLM4-0011-R4B-SM-4AT5C 60-69 years, male 39.8
GTEX-1AX9I-0011-R4b-SM-7EPIB 60-69 years, male 38.1
GTEX-1HFI6-0011-R4b-SM-A96RT 40-49 years, male 36.9
GTEX-X4XX-0011-R4B-SM-46MWL 60-69 years, male 36.8
GTEX-14PJM-0011-R4a-SM-5YYAS 50-59 years, female 36.7
GTEX-18464-0011-R4a-SM-7LG6T 50-59 years, male 34.6
GTEX-13X6I-0011-R4b-SM-5PNU9 60-69 years, male 33.8
GTEX-N7MS-0011-R4a-SM-2HMKW 60-69 years, male 33.6
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AMYGDALA - FANTOM5 CAGEi
Max Scaled Tags Per Million 43.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 43.6
FF:10151-102I7 76 years, female 43.6

AMYGDALA - Pig RNA-seqi
Average nTPM 16.7
Pig sample Sample description nTPM
Amygdala
nTPM: 16.8
Samples: 4

Max nTPM: 23.0
Min nTPM: 12.6
Sample A Female 23.0
Sample B Female 12.6
Sample C Male 16.3
Sample D Male 15.1

AMYGDALA - Mouse RNA-seqi
Average nTPM 50.6
Mouse sample Sample description nTPM
Amygdala
nTPM: 50.6
Samples: 4

Max nTPM: 53.1
Min nTPM: 47.1
Sample A Male 51.1
Sample B Male 53.1
Sample C Female 47.1
Sample D Female 51.2

AMYGDALA - Allen Mouse ISHi
Max Expression energy 4.3
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 4.3
532674 Antisense, RP_040825_01_C09, Mouse strain C57BL/6J (56 days, male) 4.3

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.