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ATP5PD
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
RNA expressioni
Consensus:261.9 nTPM
HPA:261.9 nTPM
GTEx:328.1 nTPM
FANTOM5:196.9 Scaled Tags Per Million
Pig:129.9 nTPM
Mouse:912.1 nTPM
Allen mouse:16.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA042777Antibody HPA048459
Glial cells MediumLow
Neuronal cells HighHigh




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 261.9
Sample id Sample description nTPM
Hippocampus
nTPM: 250.0
1898 Male, age 80, left hemisphere 272.0
2621 Female, age 67, right hemisphere 251.3
2529 Female, age 94, left hemisphere 250.3
1855 Male, age 76, left hemisphere 245.3
1911 Female, age 85, right hemisphere 241.9
2148 Female, age 91, left hemisphere 239.2
Dentate gyrus
nTPM: 247.8
1927 Female, age 91, both hemispheres 260.5
2010 Male, age 76, both hemispheres 256.2
2530 Female, age 94, left hemisphere 247.2
2246 Female, age 85, both hemispheres 246.2
2528 Male, age 74, both hemispheres 243.2
2531 Female, age 67, both hemispheres 233.3
Entorhinal gyrus
nTPM: 245.0
2764 Male, age 80, right hemisphere 257.4
1787 Male, age 76, left hemisphere 248.2
1938 Female, age 85, left hemisphere 247.4
2613 Female, age 94, left hemisphere 240.9
2686 Male, age 75, right hemisphere 238.5
2117 Female, age 91, right hemisphere 237.4
Hippocampus, CA1
nTPM: 258.0
2749 Male, age 80, left hemisphere 296.3
1873 Female, age 85, both hemispheres 255.4
2527 Male, age 74, both hemispheres 252.5
2045 Male, age 76, both hemispheres 244.4
2082 Female, age 91, right hemisphere 241.5
Hippocampus, CA2
nTPM: 256.0
1963 Male, age 80, left hemisphere 274.8
1892 Male, age 76, both hemispheres 269.8
2249 Male, age 74, both hemispheres 264.4
2437 Female, age 94, left hemisphere 244.5
2113 Female, age 91, right hemisphere 241.6
1940 Female, age 85, left hemisphere 240.7
Hippocampus, CA3
nTPM: 251.5
2137 Male, age 80, left hemisphere 271.2
2436 Male, age 74, both hemispheres 263.3
1867 Male, age 76, both hemispheres 260.1
1891 Female, age 85, both hemispheres 248.7
2620 Female, age 94, left hemisphere 236.6
2861 Female, age 67, both hemispheres 229.0
Parahippocampal cortex
nTPM: 249.2
1850 Male, age 80, both hemispheres 259.2
1990 Female, age 91, right hemisphere 257.8
2250 Female, age 67, right hemisphere 255.4
1933 Female, age 85, both hemispheres 254.7
2245 Female, age 91, both hemispheres 253.6
2018 Male, age 76, both hemispheres 248.6
2532 Female, age 72, left hemisphere 248.1
2693 Female, age 94, both hemispheres 243.3
2692 Male, age 74, both hemispheres 238.2
2622 Female, age 67, right hemisphere 233.1
Perirhinal gyrus
nTPM: 261.9
1847 Female, age 91, left hemisphere 276.5
1794 Male, age 80, right hemisphere 264.7
1841 Female, age 85, right hemisphere 261.9
2521 Female, age 94, right hemisphere 256.1
2848 Male, age 76, right hemisphere 250.3
Subiculum
nTPM: 248.7
1901 Male, age 80, both hemispheres 260.1
1977 Female, age 85, both hemispheres 256.0
2438 Female, age 94, left hemisphere 247.3
2042 Male, age 76, both hemispheres 245.8
2619 Male, age 74, both hemispheres 244.9
2729 Female, age 91, right hemisphere 238.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 328.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 328.1
Samples: 197

Max nTPM: 789.6
Min nTPM: 147.4
Std nTPM: 110.6
Median nTPM: 311.8
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 789.6
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 668.0
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 666.5
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 632.0
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 624.3
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 620.3
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 554.2
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 538.7
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 527.6
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 515.0
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 508.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 196.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 196.9
FF:10169-103B7 60 years, female 258.4
FF:10153-102I9 76 years, female 135.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 129.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 130.0
Samples: 4

Max nTPM: 167.0
Min nTPM: 87.7
Sample A Female 167.0
Sample B Female 124.5
Sample C Male 140.6
Sample D Male 87.7
Entorhinal cortex
nTPM: 113.4
Samples: 4

Max nTPM: 141.4
Min nTPM: 90.6
Sample A Female 119.5
Sample B Female 141.4
Sample C Male 102.1
Sample D Male 90.6
Subiculum
nTPM: 102.1
Samples: 4

Max nTPM: 139.7
Min nTPM: 79.3
Sample A Female 139.7
Sample B Female 95.8
Sample C Male 79.3
Sample D Male 93.4
Ventral hippocampus
nTPM: 112.1
Samples: 4

Max nTPM: 126.7
Min nTPM: 83.3
Sample A Female 126.7
Sample B Female 83.3
Sample C Male 115.0
Sample D Male 123.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 912.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 826.6
Samples: 4

Max nTPM: 884.4
Min nTPM: 802.1
Sample A Male 802.1
Sample B Male 804.4
Sample C Female 884.4
Sample D Female 815.6
Hippocampal formation
nTPM: 912.1
Samples: 4

Max nTPM: 1072.5
Min nTPM: 834.9
Sample A Male 1072.5
Sample B Male 851.5
Sample C Female 834.9
Sample D Female 889.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 16.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 16.3
67765702 Antisense, RP_040916_01_D05, Mouse strain C57BL/6J (56 days, male) 18.1
77371785 Antisense, RP_070116_01_C02, Mouse strain C57BL/6J (56 days, male) 14.5

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.