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RAB26
BASAL GANGLIA - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:55.8 nTPM
HPA:55.8 nTPM
GTEx:67.0 nTPM
FANTOM5:14.9 Scaled Tags Per Million
Pig:68.6 nTPM
Mouse:20.6 nTPM
Allen mouse:3.4 Expression energy

BASAL GANGLIA - Annotated protein expression
Pending normal tissue analysis

BASAL GANGLIA - HPA Brain RNA-seq
Max nTPM 55.8
Sample id Sample description nTPM
Caudate nucleus
nTPM: 50.9
1781 Male, age 74, unknown 52.4
1854 Male, age 80, left hemisphere 52.2
2289 Male, age 61, right hemisphere 51.8
2290 Female, age 72, unknown 51.7
1857 Female, age 85, left hemisphere 51.6
2846 Female, age 79, unknown 51.1
2288 Male, age 75, left hemisphere 50.4
2481 Female, age 94, left hemisphere 46.0
Claustrum
nTPM: 51.6
2198 Male, age 80, both hemispheres 55.2
2284 Female, age 91, both hemispheres 54.4
2568 Male, age 61, both hemispheres 53.8
2491 Male, age 75, both hemispheres 53.7
2645 Female, age 72, unknown 52.8
2392 Female, age 94, both hemispheres 50.9
1956 Male, age 74, unknown 49.9
2196 Female, age 79, unknown 47.0
2292 Female, age 85, both hemispheres 46.6
Globus pallidus, externus
nTPM: 43.2
2646 Male, age 61, right hemisphere 44.3
2567 Female, age 72, unknown 43.8
2772 Female, age 79, unknown 43.7
2395 Male, age 75, both hemispheres 42.7
1996 Male, age 80, right hemisphere 41.5
Globus pallidus, internus
nTPM: 42.5
2483 Female, age 94, right hemisphere 45.6
2566 Female, age 72, unknown 42.9
1818 Male, age 74, unknown 42.6
2037 Male, age 80, right hemisphere 42.0
2287 Male, age 75, right hemisphere 42.0
2778 Female, age 91, both hemispheres 41.5
2111 Female, age 85, right hemisphere 41.0
Nucleus accumbens
nTPM: 51.1
1856 Female, age 91, right hemisphere 56.6
1783 Male, age 74, unknown 55.5
2824 Male, age 61, right hemisphere 55.5
1806 Female, age 85, left hemisphere 52.2
2286 Male, age 75, left hemisphere 49.9
2698 Female, age 72, unknown 47.5
2391 Female, age 94, left hemisphere 46.2
2732 Male, age 80, right hemisphere 45.5
Nucleus basalis of Meynert
nTPM: 48.5
2484 Female, age 94, left hemisphere 51.5
2393 Male, age 80, right hemisphere 50.3
2821 Male, age 75, both hemispheres 47.8
2569 Male, age 61, both hemispheres 44.3
Nucleus of the diagonal band
nTPM: 54.1
2029 Male, age 61, right hemisphere 57.0
2775 Male, age 80, right hemisphere 56.9
1812 Female, age 91, both hemispheres 53.8
2195 Female, age 85, both hemispheres 53.6
1979 Male, age 74, unknown 49.3
Olfactory tubercle
nTPM: 55.8
1998 Female, age 91, both hemispheres 58.8
2487 Female, age 94, left hemisphere 57.0
2856 Male, age 75, right hemisphere 54.8
1846 Male, age 80, right hemisphere 52.8
Putamen
nTPM: 52.7
2466 Female, age 79, unknown 54.9
1838 Male, age 80, right hemisphere 54.8
1937 Female, age 91, right hemisphere 54.1
1829 Male, age 74, unknown 52.8
2489 Female, age 72, unknown 52.7
2647 Male, age 75, left hemisphere 50.6
2482 Female, age 94, left hemisphere 48.7
Septal nuclei
nTPM: 51.6
1960 Male, age 74, unknown 59.5
2059 Female, age 85, both hemispheres 54.1
2031 Female, age 72, unknown 52.7
2629 Female, age 94, right hemisphere 50.8
2009 Female, age 91, both hemispheres 50.7
2394 Male, age 61, left hemisphere 48.0
2199 Male, age 80, right hemisphere 45.2

BASAL GANGLIA - GTEx RNA-seqi
Max average nTPM 67.0
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 59.0
Samples: 246

Max nTPM: 162.2
Min nTPM: 5.6
Std nTPM: 20.7
Median nTPM: 57.6
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 162.2
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 131.0
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 117.6
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 112.9
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 110.5
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 108.8
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 106.3
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 102.6
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 101.3
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 100.2
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 99.4
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 62.0
Samples: 246

Max nTPM: 178.3
Min nTPM: 2.0
Std nTPM: 26.1
Median nTPM: 57.7
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 178.3
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 177.5
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 146.8
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 141.4
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 125.0
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 123.1
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 122.7
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 122.4
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 115.7
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 114.5
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 111.2
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Brain - Putamen (basal ganglia)
Average nTPM: 67.0
Samples: 205

Max nTPM: 146.4
Min nTPM: 7.0
Std nTPM: 24.8
Median nTPM: 64.5
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 146.4
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 146.0
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 120.5
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 119.7
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 119.4
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 119.2
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 117.0
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 117.0
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 113.6
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 113.6
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 112.5
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BASAL GANGLIA - FANTOM5 CAGEi
Max Scaled Tags Per Million 14.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 11.5
FF:10164-103B2 76 years, female 11.5
Globus pallidus
Scaled Tags Per Million: 4.6
FF:10175-103C4 60 years, female 5.5
FF:10161-103A8 76 years, female 3.7
Nucleus accumbens
Scaled Tags Per Million: 5.7
FF:10037-101F1 23-56 years, mixed 5.7
Putamen
Scaled Tags Per Million: 14.9
FF:10176-103C5 60 years, female 14.9

BASAL GANGLIA - Pig RNA-seqi
Average nTPM 68.6
Pig sample Sample description nTPM
Caudate
nTPM: 68.6
Samples: 4

Max nTPM: 82.7
Min nTPM: 47.6
Sample A Female 47.6
Sample B Female 82.7
Sample C Male 82.6
Sample D Male 61.4
Putamen
nTPM: 59.7
Samples: 4

Max nTPM: 71.4
Min nTPM: 25.5
Sample A Female 25.5
Sample B Female 71.0
Sample C Male 71.4
Sample D Male 70.7
Septum
nTPM: 34.8
Samples: 4

Max nTPM: 59.8
Min nTPM: 12.5
Sample A Female 53.8
Sample B Female 59.8
Sample C Male 12.5
Sample D Male 12.9
Ventral pallidum
nTPM: 44.6
Samples: 4

Max nTPM: 57.7
Min nTPM: 17.3
Sample A Female 55.4
Sample B Female 57.7
Sample C Male 17.3
Sample D Male 48.0

BASAL GANGLIA - Mouse RNA-seqi
Average nTPM 20.6
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 18.1
Samples: 4

Max nTPM: 21.2
Min nTPM: 14.5
Sample A Male 15.9
Sample B Male 14.5
Sample C Female 20.7
Sample D Female 21.2
Septum
nTPM: 18.3
Samples: 4

Max nTPM: 22.2
Min nTPM: 15.0
Sample A Male 22.2
Sample B Male 17.3
Sample C Female 18.7
Sample D Female 15.0
Ventral forebrain
nTPM: 20.6
Samples: 4

Max nTPM: 23.8
Min nTPM: 14.6
Sample A Male 23.8
Sample B Male 14.6
Sample C Female 21.2
Sample D Female 22.8

BASAL GANGLIA - Allen Mouse ISHi
Max Expression energy 3.4
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 3.4
69817817 Antisense, RP_050510_03_G12, Mouse strain C57BL/6J (56 days, male) 3.4
Pallidum
Expression energy: 1.7
69817817 Antisense, RP_050510_03_G12, Mouse strain C57BL/6J (56 days, male) 1.7

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.